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Accession: PRJNA176010 ID: 176010

Vervet Subspecies Phylogeny Project

The vervet monkey (Chlorocebus aethiops, formerly Cercopithecus aethiops) has long been among the most important non-human primate (NHP) models for biomedical research. The dramatic recent growth in the use of vervet as a model derives in part from its recognized utility as an old world monkey alternative to the rhesus macaque, of which there is now a critical shortage for biomedical research. In contrast, Caribbean-derived vervets are abundant, disease-free, small statured, and easy to handle. In addition, HIV research also has an increasing focus on vervets because in contrast to macaques, they are readily infected with simian immunodeficiency virus (SIV) but do not progress to disease.

The vervet is an ideal system for genetic discovery, which will likely increase its use dramatically over the next few years. More...

AccessionPRJNA176010
TypeUmbrella project (Subtype:Funding initiative)
Grants
  • U54-HG003079, NHGRI
SubmissionRegistration date: 26-Sep-2012
NHGRI
Related Resources
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)687
WGS master1
SRA Experiments117
Other datasets
BioSample108
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases2,332
Data volume, Tbytes1.60
This project encompasses the following 7 sub-projects:
Project TypeNumber of Projects
Genome sequencing

1
5
1
7
BioProject
accession
Assembly
level
OrganismTitle
PRJNA168472 SRA or TraceChlorocebus aethiopsGenome Sequencing of Chlorocebus aethiops aethiops (Vervet Genomics Consortium)
PRJNA168520 SRA or TraceChlorocebus cynosurosGenome sequencing of Chlorocebus aethiops cynosuros (Vervet Genomics Consortium)
PRJNA168521 SRA or TraceChlorocebus pygerythrusGenome sequencing of Chlorocebus aethiops pygerythrus (Vervet Genomics Consortium)
PRJNA168621 ChromosomesChlorocebus sabaeusChlorocebus sabaeus Genome sequencing and assembly (Vervet Genomics Consortium)
PRJNA168527 SRA or TraceChlorocebus sabaeusGenome Sequencing of Chlorocebus aethiops sabaeus (Vervet Genomics Consortium)
List all 7 'Genome sequencing' projects...

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