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Accession: PRJNA211456 ID: 211456

Listeria monocytogenes

Accession	PRJNA211456
Type	Umbrella project (Subtype:Disease)
Keyword	GMI
Submission	Registration date: 10-Jul-2013 CDC
NCBI Links	NCBI Pathogen Detection
Related Resources	NCBI Pathogen FTP Listeriosis Outbreaks FDA Applies Genome Sequencing in Outbreak Investigation Whole Genome Sequencing Helps FDA Identify Dangerous Bacteria FDA GenomeTrakr Video
Relevance	Medical, Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10728
WGS master	10552
Genomic DNA	17
SRA Experiments	11426
Protein Sequences	47702
Publications
PubMed	3
PMC	3
Other datasets
BioSample	11339
Assembly	10569

SRA Data Details

Parameter	Value
Data volume, Gbases	3,662
Data volume, Tbytes	2.04

Listeria monocytogenes encompasses the following 17 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Complete genome
Contigs
No data links
Total

1
3
13
17

BioProject accession	Assembly level	Organism	Title
PRJNA212117	Complete genome	Listeria monocytogenes	Listeria monocytogenes Genome sequencing and assembly (Enteric Diseases Laboratory...)
PRJNA266291	Contigs	Listeria monocytogenes	Listeria monocytogenes Genome sequencing and assembly (Health Canada)
PRJNA253140	Contigs	Listeria monocytogenes	Listeria monocytogenes strain:HPB5415 Genome sequencing and assembly (Health Canada)
PRJNA317408	Contigs	Listeria monocytogenes	GenomeTrakr project: Listeria monocytogenes, MDU PHL, Australia (Microbiological Diagnostics...)
PRJNA218633	No data links	Listeria monocytogenes CFSAN003725	Foodborne Pathogen Survey (FDA)

List all 17 'Genome sequencing' projects...

Supplemental Content

Related information

Assembly
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BioSample
All related BioSamples
Data projects
All Data projects
Full text in PMC
PMC links
PubMed
PubMed Links
SRA
All related SRA Experiments

Related Resources

NCBI Pathogen FTP
NCBI Pathogen FTP
Listeriosis Outbreaks
Listeriosis Outbreaks
FDA Applies Genome Sequencing in Outbreak Investigation
FDA Applies Genome Sequencing in Outbreak Investigation
Whole Genome Sequencing Helps FDA Identify Dangerous Bacteria
Whole Genome Sequencing Helps FDA Identify Dangerous Bacteria
NCBI Pathogen Detection
NCBI Pathogen Detection
FDA GenomeTrakr Video
FDA GenomeTrakr Video

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