See
Genome Information for Sphingobium
We have isolated Sphingobium sp. KK22 from a phenanthrene enrichment culture of a bacterial consortium from cattle pasture soil, USA, which grows on the heavy fraction of diesel fuel and was shown to metabolize PAHs, To acquire some biochemical findings, we attempt to perform whole genome sequencing of Sphingobium sp. KK22, and compare the sequences to those of related species.
| Accession | PRJDB1457 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Sphingobium fuliginis[Taxonomy ID: 336203] Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium; Sphingobium fuliginis |
| Publications | - Maeda AH et al., "Draft Genome Sequence of Sphingobium sp. Strain KK22, a High-Molecular-Weight Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Isolated from Cattle Pasture Soil.", Genome Announc, 2013 Nov 7;1(6)
- Kunihiro M et al., "Benz[a]anthracene biotransformation and production of ring fission products by Sphingobium sp. strain KK22.", Appl Environ Microbiol, 2013 Jul;79(14):4410-20
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| Submission | Registration date: 18-Sep-2013
Japan Agency for Marine-Earth Science and Technology |
| Locus Tag Prefix | MBESKK |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| Nucleotide (total) | 253 |
| WGS master | 1 |
| Protein Sequences | 43 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |