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Accession: PRJNA271293 ID: 271293

Salmonella enterica

GenomeTrakr Project: Argentina

See Genome Information for Salmonella enterica
Whole genome sequencing of cultured Salmonella enterica as part of the FDA GenomeTrakr surveillance project for rapid source tracking of foodborne illness outbreaks.
AccessionPRJNA271293
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica[Taxonomy ID: 28901]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
SubmissionRegistration date: 6-Dec-2018
FDA Center for Food Safety and Applied Nutrition
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)70
SRA Experiments82
Other datasets
BioSample169
Assembly70
Assembly details:
Assembly levelNumber of Assemblies
70
70
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_014514755.1ContigAAVYPJ000000000SAMN08326884
ARIMSH189-17
GCA_014514705.1ContigAAVYPF000000000SAMN08326883
ARIMSH253-16
GCA_014514605.1ContigAAVYPE000000000SAMN08326891
ARIMSH522-16
GCA_014514975.1ContigAAVYPN000000000SAMN08102397
ARIMSCHES657-17
GCA_014514925.1ContigAAVYPK000000000SAMN08234429
ARIMSH361-17
GCA_014514905.1ContigAAVYPH000000000SAMN08326864
ARIMSH515-08
GCA_014514865.1ContigAAVYPI000000000SAMN08326882
ARIMSH519-16
GCA_014514815.1ContigAAVYPG000000000SAMN08326881
ARIMSH252-16
GCA_014515115.1ContigAAVYPM000000000SAMN08102573
ARIMSANA703-17
GCA_014514995.1ContigAAVYPL000000000SAMN08102578
ARIMSCHES655-17
GCA_014761605.1ContigAAWIRJ000000000SAMN08102520
ARIMSSD702-17
GCA_014761585.1ContigAAWIRN000000000SAMN08102585
ARIMSH878-16
GCA_014761595.1ContigAAWIRK000000000SAMN08102587
ARIMSPTA280-17
GCA_014761565.1ContigAAWIRO000000000SAMN08102589
ARIMSTM628-17
GCA_014761545.1ContigAAWIRM000000000SAMN08102592
ARIMSTM626-17
GCA_014761525.1ContigAAWIRL000000000SAMN08102593
ARIMSTM627-17
GCA_014761345.1ContigAAWIRQ000000000SAMN08102583
ARIMSTM706-17
GCA_014761355.1ContigAAWIRP000000000SAMN08102581
ARIMSTM632-17
GCA_014761305.1ContigAAWIRT000000000SAMN08102414
ARIMSH258-16
GCA_014761445.1ContigAAWIRS000000000SAMN08102398
ARIMSCHES656-17
GCA_014761135.1ContigAAWIRR000000000SAMN08102530
ARIMST449-17
GCA_016323405.1ContigAAYFPO000000000SAMN03743885
ARIM-SBVM1410-05
GCA_016373085.1ContigAAYIQU000000000SAMN06172147
ARIM-STM564-08
GCA_016373025.1ContigAAYIQW000000000SAMN06172164
ARIM-STM1043-07
GCA_003873435.1ContigRSSB00000000SAMN03743896
ARIM-SE2047-05
GCA_003873355.1ContigRSSG00000000SAMN03743832
ARIM-STM1601-07
GCA_007551295.1ContigAAIGWD000000000SAMN03743846
ARIM-SCHS1083-05
GCA_007230675.1ContigAAHJNG000000000SAMN03743880
ARIM-SMBK1461-05
GCA_007764035.1ContigAAIUOE000000000SAMN06172153
ARIM-STM589-09
GCA_007764015.1ContigAAIUOH000000000SAMN03743854
ARIM-SE1187-06
GCA_007763975.1ContigAAIUOG000000000SAMN03743909
ARIM-SNEW527-07
GCA_007763895.1ContigAAIUOA000000000SAMN03743925
ARIM-STM1676-05
GCA_007763915.1ContigAAIUOD000000000SAMN03743851
ARIM-SDER124-08
GCA_008584545.1ContigAAKUUY000000000SAMN03492335
CFSAN032489
GCA_008584525.1ContigAAKUUV000000000SAMN03492331
CFSAN032485
GCA_008584445.1ContigAAKUVB000000000SAMN03492327
CFSAN032481
GCA_008584465.1ContigAAKUUU000000000SAMN03492332
CFSAN032486
GCA_008584365.1ContigAAKUUS000000000SAMN03492334
CFSAN032488
GCA_010000305.1ContigAANBOQ000000000SAMN03743865
ARIM-SSP53-08
GCA_010427385.1ContigAANSWT000000000SAMN03743841
ARIM-SBRP270-13
GCA_010538225.1ContigAAOAHP000000000SAMN03743902
ARIM-SHAD1224-08
GCA_010572585.1ContigAAOCNS000000000SAMN03743858
ARIM-SE1258-05
GCA_010640585.1ContigAAOFVV000000000SAMN03492328
CFSAN032482
GCA_010733355.1ContigAAOMNP000000000SAMN03743808
ARIM-SBVM730-07
GCA_011108295.1ContigAAPHJF000000000SAMN03492333
CFSAN032487
GCA_011429015.1ContigAAPZLK000000000SAMN03743905
ARIM-SMBK1439-05
GCA_011397155.1ContigAAPXLN000000000SAMN03743890
ARIM-SE1164-06
GCA_011414475.1ContigAAPYQV000000000SAMN03743881
ARIM-SMBK540-05
GCA_008954565.1ContigAALNYW000000000SAMN03743923
ARIM-STM1354-14
GCA_008918965.1ContigAALOIF000000000SAMN03743875
ARIM-STM137-10
GCA_008914395.1ContigAALOHZ000000000SAMN03743830
ARIM-STM444-06
GCA_008913205.1ContigAALOIC000000000SAMN03743934
ARIM-STM650-05
GCA_008918165.1ContigAALOIK000000000SAMN03743891
ARIM-SE135-06
GCA_008912185.1ContigAALNYX000000000SAMN03743933
ARIM-STM623-07
GCA_008918065.1ContigAALOIE000000000SAMN03743889
ARIM-SE1131-06
GCA_008918045.1ContigAALOIL000000000SAMN03743922
ARIM-STM1287-07
GCA_008917745.1ContigAALOIJ000000000SAMN03743839
ARIM-SBRA1024-13
GCA_008918845.1ContigAALOID000000000SAMN03743873
ARIM-SSCHW350-08
GCA_008998185.1ContigAALSXX000000000SAMN03743920
ARIM-STM1114-09
GCA_008998065.1ContigAALSXO000000000SAMN03743924
ARIM-STM1464-09
GCA_008998035.1ContigAALSXN000000000SAMN03743870
ARIM-STM714-05
GCA_008997495.1ContigAALSWF000000000SAMN03743899
ARIM-SGIVE991-10
GCA_008997455.1ContigAALSWI000000000SAMN03743931
ARIM-STM412-13
GCA_008997435.1ContigAALSWD000000000SAMN03743878
ARIM-STM927-09
GCA_008997415.1ContigAALSWC000000000SAMN03743848
ARIM-SCOR1078-05
GCA_008997375.1ContigAALSWE000000000SAMN03743850
ARIM-SCOR775-05
GCA_008997395.1ContigAALSWB000000000SAMN03743894
ARIM-SE1930-08
GCA_009088865.1ContigAALULL000000000SAMN06172163
ARIM-STM1358-07
GCA_009092765.1ContigAALXOG000000000SAMN06172155
ARIM-STM1447-07
GCA_009091505.1ContigAALXOK000000000SAMN06172151
ARIM-STM1350-09
SRA Data Details
ParameterValue
Data volume, Gbases47
Data volume, Mbytes31009

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