Enterobacteriaceae (ID 302185) - BioProject

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Accession: PRJNA302185 ID: 302185

Enterobacteriaceae

Enterobacteriaceae species causing an outbreak in hospital A genome sequencing and assembly

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This project is a component of the CRE Outbreak Evaluation Set

This project is a component of the CDC HAI-Seq

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4 additional projects are components of the CRE Outbreak Evaluation Set.

32 additional projects are components of the CDC HAI-Seq.

Extended spectrum beta-lactamase resistant Enterobacteracieae, representing multiple genera and resistance mechanisms, were discovered in a ICU step-down unit shared by both pediatric and adult patients. More...

Accession	PRJNA302185
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 13-Nov-2015 Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	33
WGS master	5
Genomic DNA	22
SRA Experiments	23
Protein Sequences	30493
Other datasets
BioSample	23
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

5
5
10

Assembly	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_016076355.1	AAXVQW000000000		SAMN09907618	E1	Citrobacter amalonaticus
GCA_003408595.1		3	SAMN04448499	A1	Enterobacter hormaechei
GCA_003408575.1		3	SAMN04448498	N1	Enterobacter hormaechei
GCA_003408555.1		6	SAMN04448506	2013_1a	Enterobacter hormaechei
GCA_015686035.1	AAXLNT000000000		SAMN09907616	A3	Enterobacter hormaechei
GCA_015685995.1	AAXLNR000000000		SAMN09907620	A5	Enterobacter hormaechei
GCA_015685975.1	AAXLNV000000000		SAMN09907617	A4	Enterobacter hormaechei
GCA_003410275.1		2	SAMN04448503	N3	Escherichia coli
GCA_003408615.1		8	SAMN04448505	N4b	Klebsiella pneumoniae
GCA_003413485.1	QVFZ00000000	2	SAMN04448502	N2b	Klebsiella pneumoniae

SRA Data Details

Parameter	Value
Data volume, Gbases	11
Data volume, Mbytes	6617

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Enterobacteriaceae

Enterobacteriaceae species causing an outbreak in hospital A genome sequencing and assembly

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