Allochromatium vinosum DSM 180 (ID 32547) - BioProject

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Accession: PRJNA32547 ID: 32547

Allochromatium vinosum DSM 180

Anoxygenic phototrophic bacteria

See Genome Information for Allochromatium vinosum

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3 additional projects are related by organism.

Allochromatium vinosum DSM 180. Allochromatium vinosum DSM 180 (the type strain) was isolated from ditch water and is a model organism for studying phototrophic sulfur organization.

Accession	PRJNA32547
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Allochromatium vinosum DSM 180[Taxonomy ID: 572477] Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum; Allochromatium vinosum DSM 180
Publications	Weissgerber T et al., "Complete genome sequence of Allochromatium vinosum DSM 180(T).", Stand Genomic Sci, 2011 Dec 31;5(3):311-30
Submission	Registration date: 16-Feb-2010 US DOE Joint Genome Institute (JGI-PGF) - JGI-PGF - DOE Joint Genome Institute
Locus Tag Prefix	ALVIN

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	3
SRA Experiments	5
Protein Sequences	3220
Publications
PubMed	1
PMC	1
Other datasets
BioSample	3
Assembly	1

Assembly details:

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Assembly	Level	Chrs	BioSample	Taxonomy
GCA_000025485.1	Complete genome	3	SAMN02598487	Allochromatium vinosum DSM 180

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	3383

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LinkOut to external resources

GOLD: Gp0001971 [Genomes On Line Database]
GOLD: Gp0001971
Genomes On Line Database
646564502: Allochromatium vinosum DSM 180 [Integrated Microbial Genomes]
646564502: Allochromatium vinosum DSM 180
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Allochromatium vinosum DSM 180
Allochromatium vinosum DSM 180
Anoxygenic phototrophic bacteria

BioProject
PREDICTED: Homo sapiens DEXD/H-box helicase 60 (DDX60), transcript variant X1, m...
PREDICTED: Homo sapiens DEXD/H-box helicase 60 (DDX60), transcript variant X1, mRNA
gi|1034640482|ref|XM_011532103.2|

Nucleotide
rho-related GTP-binding protein RhoC precursor [Homo sapiens]
rho-related GTP-binding protein RhoC precursor [Homo sapiens]
gi|111494248|ref|NP_001036143.1|

Protein
rho-related GTP-binding protein RhoC [Mus musculus]
rho-related GTP-binding protein RhoC [Mus musculus]
gi|160415213|ref|NP_031510.2|

Protein
AGENCOURT_7593547 NIH_MGC_70 Homo sapiens cDNA clone IMAGE:6020657 5', mRNA sequ...
AGENCOURT_7593547 NIH_MGC_70 Homo sapiens cDNA clone IMAGE:6020657 5', mRNA sequence
gi|20412412|gnl|dbEST|12229405|gb|B 12.1|

Nucleotide

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