Campylobacter jejuni (ID 327813) - BioProject

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Accession: PRJNA327813 ID: 327813

Campylobacter jejuni

GenomeTrakr Project: New Mexico State University Food Safety Laboratory

See Genome Information for Campylobacter jejuni

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This project is a component of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli

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633 additional projects are related by organism.

31 additional projects are components of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli.

Whole genome sequencing of cultured Campylobacter jejuni as part of the US Food and Drug Administration surveillance project for the rapid detection of food contamination events.

Accession	PRJNA327813
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Campylobacter jejuni[Taxonomy ID: 197] Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter jejuni
Submission	Registration date: 30-Apr-2019 FDA
Related Resources	New Mexico State University Food Safety Laboratory
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	112
SRA Experiments	144
Other datasets
BioSample	117
Assembly	112

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

112
112

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004943065.1	AABQDF000000000	SAMN05525235	NMSU-00376	Campylobacter jejuni
GCA_004943525.1	AABQBT000000000	SAMN05525254	NMSU-00357	Campylobacter jejuni
GCA_004942305.1	AABQCT000000000	SAMN05525236	NMSU-00375	Campylobacter jejuni
GCA_004939065.1	AABPXH000000000	SAMN05525194	NMSU-00317	Campylobacter jejuni
GCA_004939045.1	AABPXL000000000	SAMN05525193	NMSU-00318	Campylobacter jejuni
GCA_004939105.1	AABPXK000000000	SAMN05525192	NMSU-00319	Campylobacter jejuni
GCA_004939225.1	AABPXJ000000000	SAMN05525185	NMSU-00326	Campylobacter jejuni
GCA_004939465.1	AABPWM000000000	SAMN05525195	NMSU-00316	Campylobacter jejuni
GCA_004939905.1	AABPXI000000000	SAMN05525184	NMSU-00327	Campylobacter jejuni
GCA_004939885.1	AABPXE000000000	SAMN05525181	NMSU-00330	Campylobacter jejuni
GCA_004939825.1	AABPXF000000000	SAMN05525180	NMSU-00331	Campylobacter jejuni
GCA_004939785.1	AABPXG000000000	SAMN05525183	NMSU-00328	Campylobacter jejuni
GCA_004941745.1	AABQCC000000000	SAMN05525257	NMSU-00354	Campylobacter jejuni
GCA_004941605.1	AABQCR000000000	SAMN05525242	NMSU-00369	Campylobacter jejuni
GCA_005154685.1	AACELV000000000	SAMN05525229	NMSU-00382	Campylobacter jejuni
GCA_005153945.1	AACEBZ000000000	SAMN05525188	NMSU-00323	Campylobacter jejuni
GCA_005153025.1	AACECC000000000	SAMN05525182	NMSU-00329	Campylobacter jejuni
GCA_005127945.1	AACBSS000000000	SAMN05525234	NMSU-00377	Campylobacter jejuni
GCA_005127845.1	AACBSV000000000	SAMN05525227	NMSU-00384	Campylobacter jejuni
GCA_005127825.1	AACBSX000000000	SAMN05525228	NMSU-00383	Campylobacter jejuni
GCA_005127805.1	AACBSZ000000000	SAMN05525231	NMSU-00380	Campylobacter jejuni
GCA_005127785.1	AACBSY000000000	SAMN05525225	NMSU-00386	Campylobacter jejuni
GCA_005127765.1	AACBSW000000000	SAMN05525223	NMSU-00388	Campylobacter jejuni
GCA_005127705.1	AACBSR000000000	SAMN05525222	NMSU-00389	Campylobacter jejuni
GCA_005127685.1	AACBSQ000000000	SAMN05525219	NMSU-00392	Campylobacter jejuni
GCA_005127665.1	AACBSU000000000	SAMN05525221	NMSU-00390	Campylobacter jejuni
GCA_005127645.1	AACBST000000000	SAMN05525226	NMSU-00385	Campylobacter jejuni
GCA_005110525.1	AACBEI000000000	SAMN05525187	NMSU-00324	Campylobacter jejuni
GCA_005110455.1	AACBER000000000	SAMN05525264	NMSU-00347	Campylobacter jejuni
GCA_005111645.1	AACBHZ000000000	SAMN05525271	NMSU-00340	Campylobacter jejuni
GCA_005111285.1	AACBDS000000000	SAMN05525198	NMSU-00313	Campylobacter jejuni
GCA_005110985.1	AACBEH000000000	SAMN05525190	NMSU-00321	Campylobacter jejuni
GCA_005110805.1	AACBEK000000000	SAMN05525189	NMSU-00322	Campylobacter jejuni
GCA_005110695.1	AACBDP000000000	SAMN05525196	NMSU-00315	Campylobacter jejuni
GCA_005110665.1	AACBEJ000000000	SAMN05525178	NMSU-00333	Campylobacter jejuni
GCA_005111985.1	AACBEW000000000	SAMN05525175	NMSU-00336	Campylobacter jejuni
GCA_005112325.1	AACBIC000000000	SAMN05525270	NMSU-00341	Campylobacter jejuni
GCA_005112705.1	AACBIB000000000	SAMN05525266	NMSU-00345	Campylobacter jejuni
GCA_005112545.1	AACBIA000000000	SAMN05525172	NMSU-00339	Campylobacter jejuni
GCA_005112495.1	AACBHX000000000	SAMN05525265	NMSU-00346	Campylobacter jejuni
GCA_005114465.1	AACBLZ000000000	SAMN05525255	NMSU-00356	Campylobacter jejuni
GCA_005114445.1	AACBNU000000000	SAMN05525244	NMSU-00367	Campylobacter jejuni
GCA_005114625.1	AACBLY000000000	SAMN05525261	NMSU-00350	Campylobacter jejuni
GCA_005114605.1	AACBME000000000	SAMN05525262	NMSU-00349	Campylobacter jejuni
GCA_005114585.1	AACBMD000000000	SAMN05525260	NMSU-00351	Campylobacter jejuni
GCA_005114525.1	AACBNX000000000	SAMN05525239	NMSU-00372	Campylobacter jejuni
GCA_005114535.1	AACBLX000000000	SAMN05525259	NMSU-00352	Campylobacter jejuni
GCA_005114505.1	AACBMA000000000	SAMN05525258	NMSU-00353	Campylobacter jejuni
GCA_005115105.1	AACBLS000000000	SAMN05525252	NMSU-00359	Campylobacter jejuni
GCA_005116145.1	AACBNW000000000	SAMN05525245	NMSU-00366	Campylobacter jejuni
GCA_005115265.1	AACBLW000000000	SAMN05525250	NMSU-00361	Campylobacter jejuni
GCA_005115185.1	AACBLV000000000	SAMN05525247	NMSU-00364	Campylobacter jejuni
GCA_005115165.1	AACBLR000000000	SAMN05525248	NMSU-00363	Campylobacter jejuni
GCA_005116385.1	AACBNY000000000	SAMN05525243	NMSU-00368	Campylobacter jejuni
GCA_005116025.1	AACBNT000000000	SAMN05525240	NMSU-00371	Campylobacter jejuni
GCA_005173225.1	AACFML000000000	SAMN05525212	NMSU-00399	Campylobacter jejuni
GCA_005173425.1	AACFKZ000000000	SAMN05525232	NMSU-00379	Campylobacter jejuni
GCA_005173525.1	AACFMK000000000	SAMN05525179	NMSU-00332	Campylobacter jejuni
GCA_005173985.1	AACFLJ000000000	SAMN05525177	NMSU-00334	Campylobacter jejuni
GCA_005178195.1	AACFUH000000000	SAMN05525214	NMSU-00397	Campylobacter jejuni
GCA_005162015.1	AACERB000000000	SAMN05525233	NMSU-00378	Campylobacter jejuni
GCA_005162105.1	AACERY000000000	SAMN05525213	NMSU-00398	Campylobacter jejuni
GCA_005164315.1	AACEWE000000000	SAMN05525230	NMSU-00381	Campylobacter jejuni
GCA_005164225.1	AACEWA000000000	SAMN05525220	NMSU-00391	Campylobacter jejuni
GCA_005165125.1	AACEWW000000000	SAMN05525267	NMSU-00344	Campylobacter jejuni
GCA_005165965.1	AACERL000000000	SAMN05525253	NMSU-00358	Campylobacter jejuni
GCA_005155615.1	AACELU000000000	SAMN05525174	NMSU-00337	Campylobacter jejuni
GCA_005155375.1	AACEDM000000000	SAMN05525191	NMSU-00320	Campylobacter jejuni
GCA_005155315.1	AACEJT000000000	SAMN05525269	NMSU-00342	Campylobacter jejuni
GCA_005157265.1	AACEHR000000000	SAMN05525176	NMSU-00335	Campylobacter jejuni
GCA_005156465.1	AACEFR000000000	SAMN05525197	NMSU-00314	Campylobacter jejuni
GCA_005156375.1	AACEFT000000000	SAMN05525237	NMSU-00374	Campylobacter jejuni
GCA_005158965.1	AACEKY000000000	SAMN05908662	32488	Campylobacter jejuni
GCA_005159105.1	AACEKW000000000	SAMN05525173	NMSU-00338	Campylobacter jejuni
GCA_005158805.1	AACEKG000000000	SAMN05525241	NMSU-00370	Campylobacter jejuni
GCA_005158135.1	AACEJJ000000000	SAMN05525224	NMSU-00387	Campylobacter jejuni
GCA_005255505.1	AACKTC000000000	SAMN05525251	NMSU-00360	Campylobacter jejuni
GCA_005255485.1	AACKTF000000000	SAMN05525256	NMSU-00355	Campylobacter jejuni
GCA_005256205.1	AACKUS000000000	SAMN05525217	NMSU-00394	Campylobacter jejuni
GCA_005256175.1	AACKUR000000000	SAMN05525268	NMSU-00343	Campylobacter jejuni
GCA_005256305.1	AACKUW000000000	SAMN05525238	NMSU-00373	Campylobacter jejuni
GCA_005256265.1	AACKUT000000000	SAMN05525211	NMSU-00400	Campylobacter jejuni
GCA_005256245.1	AACKUV000000000	SAMN05525263	NMSU-00348	Campylobacter jejuni
GCA_005210285.1	AACIBZ000000000	SAMN05525249	NMSU-00362	Campylobacter jejuni
GCA_005211185.1	AACIFL000000000	SAMN05525218	NMSU-00393	Campylobacter jejuni
GCA_005300645.1	AACNYG000000000	SAMN05525199	NMSU-00312	Campylobacter jejuni
GCA_005300665.1	AACNYE000000000	SAMN05525200	NMSU-00311	Campylobacter jejuni
GCA_005300265.1	AACNXV000000000	SAMN05525204	NMSU-00307	Campylobacter jejuni
GCA_005300385.1	AACNYB000000000	SAMN05525206	NMSU-00305	Campylobacter jejuni
GCA_005300325.1	AACNXX000000000	SAMN05525208	NMSU-00303	Campylobacter jejuni
GCA_005300595.1	AACNYD000000000	SAMN05525201	NMSU-00310	Campylobacter jejuni
GCA_005300565.1	AACNYC000000000	SAMN05525203	NMSU-00308	Campylobacter jejuni
GCA_005300535.1	AACNYA000000000	SAMN05525205	NMSU-00306	Campylobacter jejuni
GCA_005300505.1	AACNXZ000000000	SAMN05525209	NMSU-00302	Campylobacter jejuni
GCA_005300485.1	AACNYF000000000	SAMN05525202	NMSU-00309	Campylobacter jejuni
GCA_005300445.1	AACNXT000000000	SAMN05525210	NMSU-00301	Campylobacter jejuni
GCA_005300405.1	AACNXY000000000	SAMN05525207	NMSU-00304	Campylobacter jejuni
GCA_008526675.1	AAKRFP000000000	SAMN05525216	NMSU-00395	Campylobacter jejuni
GCA_019297935.1	ABBKJE000000000	SAMN20331735	JWC-BB7	Campylobacter jejuni
GCA_019297915.1	ABBKJC000000000	SAMN20331737	JWC-BB9	Campylobacter jejuni
GCA_019297895.1	ABBKJD000000000	SAMN20331736	JWC-BB8	Campylobacter jejuni
GCA_019297875.1	ABBKJB000000000	SAMN20331734	JWC-BB6	Campylobacter jejuni
GCA_019298015.1	ABBKJH000000000	SAMN20331730	JWC-BB2	Campylobacter jejuni
GCA_019298275.1	ABBKJP000000000	SAMN20331732	JWC-BB4	Campylobacter jejuni
GCA_019298215.1	ABBKJN000000000	SAMN20331733	JWC-BB5	Campylobacter jejuni
GCA_019298195.1	ABBKJR000000000	SAMN20331727	JWC-BB14	Campylobacter jejuni
GCA_019298165.1	ABBKJQ000000000	SAMN20331729	JWC-BB16	Campylobacter jejuni
GCA_019298155.1	ABBKJT000000000	SAMN20331726	JWC-BB13	Campylobacter jejuni
GCA_019298135.1	ABBKJO000000000	SAMN20331731	JWC-BB3	Campylobacter jejuni
GCA_019298115.1	ABBKJS000000000	SAMN20331728	JWC-BB15	Campylobacter jejuni
GCA_019298095.1	ABBKJF000000000	SAMN20331725	JWC-BB12	Campylobacter jejuni
GCA_019298075.1	ABBKJK000000000	SAMN20331724	JWC-BB1	Campylobacter jejuni

SRA Data Details

Parameter	Value
Data volume, Gbases	42
Data volume, Mbytes	23937

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Campylobacter jejuni

GenomeTrakr Project: New Mexico State University Food Safety Laboratory

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