See
Genome Information for Klebsormidium nitens
Analysis of Klebsormidium nitens NIES-2285 by Klebsormidium genome project team in japan (NIES-2285 strain was taxonomically reclassified from K. flaccidum).
| Accession | PRJDB4956 |
| Type | Umbrella project |
| Organism | Klebsormidium nitens[Taxonomy ID: 105231] Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium; Klebsormidium nitens |
| Publications | Hori K et al., "Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.", Nat Commun, 2014 May 28;5:3978 |
| Submission | Registration date: 5-Jul-2016
Tokyo Institute of Technology, School of Life Science and Technology |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 1815 |
| WGS master | 1 |
| SRA Experiments | 16 |
| Protein Sequences | 16283 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 12 |
| Assembly | 1 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Scaffolds |
1
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJDB718 | Scaffolds | Klebsormidium nitens | genome sequence project of a filamentous terrestrial alga Klebsormidium nitens NIES-2285 (NIES-2285 strain was taxonomically reclassified from K. flaccidum) (Tokyo Institute of Technology,...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJDB4958 | Klebsormidium nitens | RNA-seq of Klebsormidium nitens NIES-2285 in the presence of IAA (NIES-2285 strain was taxonomically reclassified from K. flaccidum) (Tokyo Institute of Technology,...) | | PRJDB15075 | Klebsormidium nitens | CAGE-seq of Klebsormidium nitens NIES-2285 (Tokyo Institute of Technology,...) |
|