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Accession: PRJNA354842 ID: 354842

Glycine soja cultivar:N24852

Identification and Analysis of NaHCO3 Stress Responsive Genes in Wild Soybean (Glycine soja) Roots by RNA-seq

See Genome Information for Glycine soja
Root is the primary tissue in soil encountering alkaline stress, therefore in this research, we investigated the transcriptome profiles in the roots of an alkalinity-tolerant wild soybean variety, N24852, using quartz sand culture medium subjected to higher concentration of NaHCO3 (90 mM), which is more similar to the alkalinity in the field. More...
AccessionPRJNA354842
Data TypeRaw sequence reads
ScopeMonoisolate
OrganismGlycine soja[Taxonomy ID: 3848]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja; Glycine soja
SubmissionRegistration date: 24-Nov-2016
Nanjing Agricultural University
RelevanceAgricultural
Locus Tag PrefixBSP74
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Other datasets
BioSample12
SRA Data Details
ParameterValue
Data volume, Gbases66
Data volume, Mbytes25734

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  • Glycine soja cultivar:N24852
    Glycine soja cultivar:N24852
    Identification and Analysis of NaHCO3 Stress Responsive Genes in Wild Soybean (Glycine soja) Roots by RNA-seq
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