marine metagenome (ID 358725) - BioProject

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Accession: PRJNA358725 ID: 358725

marine metagenome

Meta-genomic and -transcriptomic samples from the HOE Legacy 2 expedition

Meta-genomic and -transcriptomic samples from the HOE Legacy 2 expedition.

Accession	PRJNA358725
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Submission	Registration date: 29-Sep-2017 SCOPE
Related Resources	HOE Legacy overview
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	69
SRA Experiments	138
Other datasets
BioSample	209
Assembly	70

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

53
17
70

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_022448445.1	JAKVAL000000000	SAMN25998914	ALOHA_ZT_1	Alteromonas sp.
GCA_022448405.1	JAKVAM000000000	SAMN25998915	ALOHA_ZT_2	Aquabacterium sp.
GCA_022448205.1	JAKVAN000000000	SAMN25998916	ALOHA_ZT_3	Blastomonas sp.
GCA_022447685.1	JAKVAO000000000	SAMN25998917	ALOHA_ZT_4	Candidatus Caenarcanales bacterium
GCA_022448215.1	JAKVBB000000000	SAMN25998930	ALOHA_ZT_17	Candidatus Gracilibacteria bacterium
GCA_022446925.1	JAKVAP000000000	SAMN25998918	ALOHA_ZT_5	Cognatishimia sp.
GCA_022447665.1	JAKVAQ000000000	SAMN25998919	ALOHA_ZT_6	Crocinitomicaceae bacterium
GCA_022447585.1	JAKVAR000000000	SAMN25998920	ALOHA_ZT_7	Crocinitomicaceae bacterium
GCA_022448165.1	JAKVAS000000000	SAMN25998921	ALOHA_ZT_8	Crocinitomicaceae bacterium
GCA_022448125.1	JAKVAT000000000	SAMN25998922	ALOHA_ZT_9	Crocosphaera sp.
GCA_022447705.1	JAKVAU000000000	SAMN25998923	ALOHA_ZT_10	Dechloromonas sp.
GCA_022447635.1	JAKVAW000000000	SAMN25998925	ALOHA_ZT_12	Flavobacteriales bacterium
GCA_022447625.1	JAKVAX000000000	SAMN25998926	ALOHA_ZT_13	Flavobacteriales bacterium
GCA_022448105.1	JAKVAV000000000	SAMN25998924	ALOHA_ZT_11	Flavobacteriales bacterium
GCA_022447225.1	JAKVAZ000000000	SAMN25998928	ALOHA_ZT_15	Fuerstiella sp.
GCA_022447185.1	JAKVAY000000000	SAMN25998927	ALOHA_ZT_14	Fuerstiella sp.
GCA_022447525.1	JAKVBA000000000	SAMN25998929	ALOHA_ZT_16	Gammaproteobacteria bacterium
GCA_022447245.1	JAKVBC000000000	SAMN25998931	ALOHA_ZT_18	Kordia sp.
GCA_022446985.1	JAKVBD000000000	SAMN25998932	ALOHA_ZT_19	Lentisphaerales bacterium
GCA_022447755.1	JAKVBE000000000	SAMN25998933	ALOHA_ZT_20	Lentisphaeria bacterium
GCA_022447555.1	JAKVBF000000000	SAMN25998934	ALOHA_ZT_21	Mariniblastus sp.
GCA_022447605.1	JAKVBG000000000	SAMN25998935	ALOHA_ZT_22	Mariniblastus sp.
GCA_022447495.1	JAKVBH000000000	SAMN25998936	ALOHA_ZT_23	Marinovum sp.
GCA_022447545.1	JAKVBI000000000	SAMN25998937	ALOHA_ZT_24	Myxococcota bacterium
GCA_022447325.1	JAKVBJ000000000	SAMN25998938	ALOHA_ZT_25	Myxococcota bacterium
GCA_022447275.1	JAKVBK000000000	SAMN25998939	ALOHA_ZT_26	Oceanicola sp.
GCA_022447365.1	JAKVBL000000000	SAMN25998940	ALOHA_ZT_27	Oleiphilaceae bacterium
GCA_022446765.1	JAKVBM000000000	SAMN25998941	ALOHA_ZT_28	Opitutales bacterium
GCA_022448245.1	JAKVCO000000000	SAMN25998969	ALOHA_ZT_56	Paracoccaceae bacterium
GCA_022448925.1	JAKVCP000000000	SAMN25998970	ALOHA_ZT_57	Paracoccaceae bacterium
GCA_022448285.1	JAKVBN000000000	SAMN25998942	ALOHA_ZT_29	Phycisphaerales bacterium
GCA_022446795.1	JAKVBX000000000	SAMN25998952	ALOHA_ZT_39	Phycisphaerales bacterium
GCA_022446775.1	JAKVBP000000000	SAMN25998944	ALOHA_ZT_31	Phycisphaerales bacterium
GCA_022446865.1	JAKVBO000000000	SAMN25998943	ALOHA_ZT_30	Phycisphaerales bacterium
GCA_022447005.1	JAKVBS000000000	SAMN25998947	ALOHA_ZT_34	Phycisphaerales bacterium
GCA_022446965.1	JAKVBV000000000	SAMN25998950	ALOHA_ZT_37	Phycisphaerales bacterium
GCA_022446945.1	JAKVBW000000000	SAMN25998951	ALOHA_ZT_38	Phycisphaerales bacterium
GCA_022446905.1	JAKVBT000000000	SAMN25998948	ALOHA_ZT_35	Phycisphaerales bacterium
GCA_022446885.1	JAKVBU000000000	SAMN25998949	ALOHA_ZT_36	Phycisphaerales bacterium
GCA_022447205.1	JAKVBQ000000000	SAMN25998945	ALOHA_ZT_32	Phycisphaerales bacterium
GCA_022447165.1	JAKVBR000000000	SAMN25998946	ALOHA_ZT_33	Phycisphaerales bacterium
GCA_022446825.1	JAKVBY000000000	SAMN25998953	ALOHA_ZT_40	Pirellulaceae bacterium
GCA_022448315.1	JAKVCA000000000	SAMN25998955	ALOHA_ZT_42	Pirellulaceae bacterium
GCA_022448645.1	JAKVBZ000000000	SAMN25998954	ALOHA_ZT_41	Pirellulaceae bacterium
GCA_022448265.1	JAKVCC000000000	SAMN25998957	ALOHA_ZT_44	Pirellulales bacterium
GCA_022448345.1	JAKVCB000000000	SAMN25998956	ALOHA_ZT_43	Pirellulales bacterium
GCA_022446815.1	JAKVCD000000000	SAMN25998958	ALOHA_ZT_45	Planctomycetota bacterium
GCA_022447405.1	JAKVCE000000000	SAMN25998959	ALOHA_ZT_46	Planctomycetota bacterium
GCA_022447375.1	JAKVCG000000000	SAMN25998961	ALOHA_ZT_48	Planctomycetota bacterium
GCA_022447335.1	JAKVCF000000000	SAMN25998960	ALOHA_ZT_47	Planctomycetota bacterium
GCA_022447485.1	JAKVCH000000000	SAMN25998962	ALOHA_ZT_49	Polyangiaceae bacterium
GCA_022447305.1	JAKVCI000000000	SAMN25998963	ALOHA_ZT_50	Prochlorococcus sp. ALOHA_ZT_50
GCA_022447445.1	JAKVCJ000000000	SAMN25998964	ALOHA_ZT_51	Pseudoalteromonas sp.
GCA_022447465.1	JAKVCK000000000	SAMN25998965	ALOHA_ZT_52	Pseudomonadales bacterium
GCA_022447425.1	JAKVCL000000000	SAMN25998966	ALOHA_ZT_53	Pseudoxanthomonas sp.
GCA_022448605.1	JAKVCM000000000	SAMN25998967	ALOHA_ZT_54	Puniceicoccaceae bacterium
GCA_022448585.1	JAKVCN000000000	SAMN25998968	ALOHA_ZT_55	Puniceicoccaceae bacterium
GCA_022452085.1	JAKVCQ000000000	SAMN25998971	ALOHA_ZT_58	Rickettsiales bacterium
GCA_022448985.1	JAKVCR000000000	SAMN25998972	ALOHA_ZT_59	Roseibacillus sp.
GCA_022448365.1	JAKVCS000000000	SAMN25998973	ALOHA_ZT_60	Saccharospirillaceae bacterium
GCA_022448995.1	JAKVCT000000000	SAMN25998974	ALOHA_ZT_61	Saprospiraceae bacterium
GCA_022448955.1	JAKVCU000000000	SAMN25998975	ALOHA_ZT_62	Saprospiraceae bacterium
GCA_022448945.1	JAKVCV000000000	SAMN25998976	ALOHA_ZT_63	Saprospiraceae bacterium
GCA_022448905.1	JAKVCW000000000	SAMN25998977	ALOHA_ZT_64	Shimia sp.
GCA_022448525.1	JAKVCX000000000	SAMN25998978	ALOHA_ZT_65	Tenacibaculum sp.
GCA_022448425.1	JAKVCY000000000	SAMN25998979	ALOHA_ZT_66	Thalassotalea sp.
GCA_022448615.1	JAKVCZ000000000	SAMN25998980	ALOHA_ZT_67	Trichodesmium sp. ALOHA_ZT_67
GCA_022448535.1	JAKVDB000000000	SAMN25998982	ALOHA_ZT_69	Verrucomicrobiales bacterium
GCA_022448385.1	JAKVDA000000000	SAMN25998981	ALOHA_ZT_68	Verrucomicrobiales bacterium
GCA_002406415.1	NTLX00000000	SAMN07250028	-	marine metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	745
Data volume, Tbytes	0.32

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marine metagenome

Meta-genomic and -transcriptomic samples from the HOE Legacy 2 expedition

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