Pseudomonas syringae pv. actinidiae (ID 359702) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA359702 ID: 359702

Pseudomonas syringae pv. actinidiae

Origin and evolution of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae

See Genome Information for Pseudomonas syringae

Navigate Across

399 additional projects are related by organism.

Phylogeography and epidemiology of the kiwifruit (Actinidia spp.) pathogen Pseudomonas syringae pv. More...

Accession	PRJNA359702
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pseudomonas syringae pv. actinidiae[Taxonomy ID: 103796] Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae; Pseudomonas syringae pv. actinidiae
Publications	McCann HC et al., "Origin and Evolution of the Kiwifruit Canker Pandemic.", Genome Biol Evol, 2017 Apr 1;9(4):932-944
Submission	Registration date: 27-Apr-2017 - Massey University - New Zealand Genomics Limited - Novogene
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	15348
WGS master	48
SRA Experiments	50
Protein Sequences	271802
Publications
PubMed	1
PMC	1
Other datasets
BioSample	50
Assembly	48

Assembly details:

Download

Assembly level

Number of Assemblies

Scaffold

Contig

Total

27
21
48

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002113925.1	MTZK00000000	SAMN06197094	NZ54	Pseudomonas syringae pv. actinidiae
GCA_002113905.1	MTZA00000000	SAMN06197084	NZ39	Pseudomonas syringae pv. actinidiae
GCA_002112135.1	MTZJ00000000	SAMN06197093	NZ49	Pseudomonas syringae pv. actinidiae
GCA_002112125.1	MTZI00000000	SAMN06197091	NZ47	Pseudomonas syringae pv. actinidiae
GCA_002112165.1	MTZL00000000	SAMN06197095	NZ59	Pseudomonas syringae pv. actinidiae
GCA_002112095.1	MTZH00000000	SAMN06197092	NZ48	Pseudomonas syringae pv. actinidiae
GCA_002112085.1	MTZG00000000	SAMN06197090	NZ46	Pseudomonas syringae pv. actinidiae
GCA_002112005.1	MTZD00000000	SAMN06197087	NZ42	Pseudomonas syringae pv. actinidiae
GCA_002112065.1	MTZF00000000	SAMN06197089	NZ45	Pseudomonas syringae pv. actinidiae
GCA_002112045.1	MTZE00000000	SAMN06197088	NZ43	Pseudomonas syringae pv. actinidiae
GCA_002111995.1	MTZB00000000	SAMN06197085	NZ40	Pseudomonas syringae pv. actinidiae
GCA_002111985.1	MTZC00000000	SAMN06197086	NZ41	Pseudomonas syringae pv. actinidiae
GCA_002111955.1	MTYZ00000000	SAMN06197083	NZ38	Pseudomonas syringae pv. actinidiae
GCA_002111945.1	MTYY00000000	SAMN06197082	NZ37	Pseudomonas syringae pv. actinidiae
GCA_002111925.1	MTYX00000000	SAMN06197081	NZ35	Pseudomonas syringae pv. actinidiae
GCA_002111885.1	MTYW00000000	SAMN06197080	K7	Pseudomonas syringae pv. actinidiae
GCA_002111875.1	MTYU00000000	SAMN06197078	K5	Pseudomonas syringae pv. actinidiae
GCA_002111865.1	MTYV00000000	SAMN06197079	K6	Pseudomonas syringae pv. actinidiae
GCA_002111835.1	MTYT00000000	SAMN06197077	K4	Pseudomonas syringae pv. actinidiae
GCA_002111805.1	MTYS00000000	SAMN06197075	J38	Pseudomonas syringae pv. actinidiae
GCA_002111795.1	MTYR00000000	SAMN06197074	C75	Pseudomonas syringae pv. actinidiae
GCA_002111785.1	MTYQ00000000	SAMN06197073	C74	Pseudomonas syringae pv. actinidiae
GCA_002111755.1	MTYP00000000	SAMN06197072	C73	Pseudomonas syringae pv. actinidiae
GCA_002111745.1	MTYO00000000	SAMN06197070	C69	Pseudomonas syringae pv. actinidiae
GCA_002111695.1	MTYN00000000	SAMN06197071	C70	Pseudomonas syringae pv. actinidiae
GCA_002111685.1	MTYM00000000	SAMN06197069	C68	Pseudomonas syringae pv. actinidiae
GCA_002111675.1	MTYK00000000	SAMN06197067	C66	Pseudomonas syringae pv. actinidiae
GCA_002111665.1	MTYL00000000	SAMN06197068	C67	Pseudomonas syringae pv. actinidiae
GCA_002174875.1	MTCQ00000000	SAMN06197031	C3	Pseudomonas syringae pv. actinidiae
GCA_002175005.1	MTHQ00000000	SAMN06197055	C17	Pseudomonas syringae pv. actinidiae
GCA_002174985.1	MTHN00000000	SAMN06197052	C14	Pseudomonas syringae pv. actinidiae
GCA_002174995.1	MTHP00000000	SAMN06197054	C16	Pseudomonas syringae pv. actinidiae
GCA_002174975.1	MTHO00000000	SAMN06197053	C15	Pseudomonas syringae pv. actinidiae
GCA_002174935.1	MTHK00000000	SAMN06197049	C11	Pseudomonas syringae pv. actinidiae
GCA_002174905.1	MTHJ00000000	SAMN06197048	C10	Pseudomonas syringae pv. actinidiae
GCA_002174925.1	MTHM00000000	SAMN06197051	C13	Pseudomonas syringae pv. actinidiae
GCA_002174895.1	MTHL00000000	SAMN06197050	C12	Pseudomonas syringae pv. actinidiae
GCA_002175245.1	MTIB00000000	SAMN06197066	C62	Pseudomonas syringae pv. actinidiae
GCA_002175215.1	MTHZ00000000	SAMN06197064	C48	Pseudomonas syringae pv. actinidiae
GCA_002175225.1	MTIA00000000	SAMN06197065	C54	Pseudomonas syringae pv. actinidiae
GCA_002175185.1	MTHY00000000	SAMN06197063	C31	Pseudomonas syringae pv. actinidiae
GCA_002175175.1	MTHW00000000	SAMN06197061	C29	Pseudomonas syringae pv. actinidiae
GCA_002175135.1	MTHV00000000	SAMN06197060	C28	Pseudomonas syringae pv. actinidiae
GCA_002175145.1	MTHX00000000	SAMN06197062	C30	Pseudomonas syringae pv. actinidiae
GCA_002175085.1	MTHS00000000	SAMN06197057	C24	Pseudomonas syringae pv. actinidiae
GCA_002175075.1	MTHU00000000	SAMN06197059	C27	Pseudomonas syringae pv. actinidiae
GCA_002175065.1	MTHR00000000	SAMN06197056	C18	Pseudomonas syringae pv. actinidiae
GCA_002175055.1	MTHT00000000	SAMN06197058	C26	Pseudomonas syringae pv. actinidiae

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	28474

BioProject

Result Filters

Display Settings:

Send to:

Pseudomonas syringae pv. actinidiae

Origin and evolution of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae

Supplemental Content

Related information

LinkOut to external resources

Recent activity