Salmonella enterica (ID 368989) - BioProject

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Accession: PRJNA368989 ID: 368989

Salmonella enterica

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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3959 additional projects are related by organism.

75 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.

Whole genome sequencing of cultured Salmonella enterica as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA368989
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 6-Dec-2018 FDA
Related Resources	Michigan Department of Agriculture and Rural Development
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	110
SRA Experiments	235
Other datasets
BioSample	209
Assembly	110

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

110
110

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_017102545.1	AAZBOO000000000	SAMN18074450	PNUSAS193230	Salmonella enterica
GCA_017102745.1	AAZBOL000000000	SAMN18074451	PNUSAS193231	Salmonella enterica
GCA_017102725.1	AAZBOJ000000000	SAMN18074441	PNUSAS193221	Salmonella enterica
GCA_017102685.1	AAZBOK000000000	SAMN18074440	PNUSAS193220	Salmonella enterica
GCA_017102885.1	AAZBOW000000000	SAMN18074442	PNUSAS193222	Salmonella enterica
GCA_017102865.1	AAZBPT000000000	SAMN18074444	PNUSAS193224	Salmonella enterica
GCA_017103005.1	AAZBOS000000000	SAMN18074453	PNUSAS193233	Salmonella enterica
GCA_017102965.1	AAZBOZ000000000	SAMN18074454	PNUSAS193234	Salmonella enterica
GCA_017102945.1	AAZBOX000000000	SAMN18074455	PNUSAS193235	Salmonella enterica
GCA_017103025.1	AAZBOR000000000	SAMN18074452	PNUSAS193232	Salmonella enterica
GCA_017102985.1	AAZBOU000000000	SAMN18074446	PNUSAS193226	Salmonella enterica
GCA_017103065.1	AAZBPS000000000	SAMN18074447	PNUSAS193227	Salmonella enterica
GCA_017103085.1	AAZBPD000000000	SAMN18074449	PNUSAS193229	Salmonella enterica
GCA_017103505.1	AAZBPV000000000	SAMN18074448	PNUSAS193228	Salmonella enterica
GCA_017103485.1	AAZBPU000000000	SAMN18074445	PNUSAS193225	Salmonella enterica
GCA_017103425.1	AAZBPX000000000	SAMN18074443	PNUSAS193223	Salmonella enterica
GCA_006074435.1	AAENAI000000000	SAMN08163903	TW18132	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_006044425.1	AAEKTT000000000	SAMN06277373	14FMPE000163	Salmonella enterica
GCA_005998365.1	AAEHLR000000000	SAMN08163900	TW18143	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_005996125.1	AAEHHH000000000	SAMN06477699	MDP10-00062	Salmonella enterica
GCA_005815185.1	AADVVH000000000	SAMN10523684	18FMEN000930	Salmonella enterica
GCA_005815145.1	AADVVD000000000	SAMN10523686	18FMEN000940	Salmonella enterica
GCA_005759855.1	AADTNP000000000	SAMN09484355	18FMEN000600	Salmonella enterica
GCA_005759695.1	AADTOC000000000	SAMN09630345	18FMEN000627	Salmonella enterica
GCA_005757275.1	AADTKR000000000	SAMN09222601	18FMFO000274-1	Salmonella enterica
GCA_005829985.1	AADWVG000000000	SAMN10620980	18FMPE000177-2	Salmonella enterica
GCA_005829945.1	AADWVD000000000	SAMN10620975	18FMPE000177-1	Salmonella enterica
GCA_006193945.1	AAEVNF000000000	SAMN08377493	18FMFA000068-10	Salmonella enterica
GCA_006314945.1	AAFDFT000000000	SAMN08558333	18FMPF000008-1	Salmonella enterica
GCA_006313245.1	AAFDDL000000000	SAMN08377491	18FMFA000068-1	Salmonella enterica
GCA_006344685.1	AAFFJI000000000	SAMN06277389	13FMPE000066	Salmonella enterica
GCA_005486915.1	AACZXT000000000	SAMN10287952	18FMEN000582	Salmonella enterica
GCA_005474045.1	AACZBQ000000000	SAMN10620989	18FMPE000178-1	Salmonella enterica
GCA_005407205.1	AACUCX000000000	SAMN09484349	18FMEN000629	Salmonella enterica
GCA_005440315.1	AACWNO000000000	SAMN09484312	18FMEN000611	Salmonella enterica
GCA_005440235.1	AACWNI000000000	SAMN09484352	18FMEN000606	Salmonella enterica
GCA_005439555.1	AACWNG000000000	SAMN09630346	18FMEN000626	Salmonella enterica
GCA_005439415.1	AACWNJ000000000	SAMN09484364	18FMEN000564	Salmonella enterica
GCA_005412915.1	AACUNS000000000	SAMN09484374	18FMEN000628	Salmonella enterica
GCA_005610595.1	AADIPG000000000	SAMN09630329	18FMEN000625	Salmonella enterica
GCA_005610405.1	AADIOT000000000	SAMN09484376	18FMEN000616	Salmonella enterica
GCA_005610335.1	AADIOK000000000	SAMN09484360	18FMEN000560	Salmonella enterica
GCA_005581635.1	AADGLA000000000	SAMN10287824	18FMEN000581	Salmonella enterica
GCA_005581645.1	AADGLH000000000	SAMN10287829	18FMEN000574	Salmonella enterica
GCA_005535515.1	AADDEL000000000	SAMN09222602	18FMFO000274-11	Salmonella enterica
GCA_005529305.1	AADCSG000000000	SAMN10287951	18FMEN000550	Salmonella enterica
GCA_005537975.1	AADDIB000000000	SAMN09484353	18FMEN000567	Salmonella enterica
GCA_005536535.1	AADDHH000000000	SAMN09484383	18FMEN000612	Salmonella enterica
GCA_005536295.1	AADDHJ000000000	SAMN09484325	18FMEN000617	Salmonella enterica
GCA_005565825.1	AADFJO000000000	SAMN10523688	18FMEN000970	Salmonella enterica
GCA_005565775.1	AADFJM000000000	SAMN10523685	18FMEN000891	Salmonella enterica
GCA_005565675.1	AADFJS000000000	SAMN10523682	18FMEN000902	Salmonella enterica
GCA_005569555.1	AADFOS000000000	SAMN10523683	18FMEN000929	Salmonella enterica
GCA_005718735.1	AADQBA000000000	SAMN10523687	18FMEN000956	Salmonella enterica
GCA_005718715.1	AADQBD000000000	SAMN10523590	18FMEN000898	Salmonella enterica
GCA_005730935.1	AADRAP000000000	SAMN08963876	18FMPE000095	Salmonella enterica
GCA_005722775.1	AADQSI000000000	SAMN10523689	18FMEN000901	Salmonella enterica
GCA_005698695.1	AADPAF000000000	SAMN09772666	18FMEN000622	Salmonella enterica
GCA_005698675.1	AADPAC000000000	SAMN09772665	18FMEN000607	Salmonella enterica
GCA_005680675.1	AADNRU000000000	SAMN09484378	18FMEN000615	Salmonella enterica
GCA_005658135.1	AADLTX000000000	SAMN10287848	18FMEN000569	Salmonella enterica
GCA_005655875.1	AADLPS000000000	SAMN08558331	18FMPF000008-2	Salmonella enterica
GCA_005646635.1	AADKXY000000000	SAMN10620988	18FMPE000178-2	Salmonella enterica
GCA_005626075.1	AADJSM000000000	SAMN09772659	18FMEN000573	Salmonella enterica
GCA_005626055.1	AADJSS000000000	SAMN09772657	18FMEN000552	Salmonella enterica
GCA_005642575.1	AADKRX000000000	SAMN10523591	18FMEN000932	Salmonella enterica
GCA_005642495.1	AADKSB000000000	SAMN10523690	18FMEN000892	Salmonella enterica
GCA_003891585.1	RTVL00000000	SAMN09772668	18FMEN000624	Salmonella enterica
GCA_003891755.1	RTVG00000000	SAMN09772667	18FMEN000623	Salmonella enterica
GCA_004187345.1	AAABZZ000000000	SAMN09484366	18FMEN000556	Salmonella enterica
GCA_004225865.1	AAADCK000000000	SAMN08163893	TW18126	Salmonella enterica subsp. enterica serovar Newport
GCA_004224405.1	AAACXS000000000	SAMN09484358	18FMEN000577	Salmonella enterica
GCA_004220925.1	AAACQZ000000000	SAMN09484381	18FMEN000614	Salmonella enterica
GCA_024108615.1	ABGWCT000000000	SAMN29445004	PNUSAS280179	Salmonella enterica
GCA_040152025.1	ABSWZE000000000	SAMN41788774	24MDARD135	Salmonella enterica
GCA_040151925.1	ABSWZD000000000	SAMN41788772	24MDARD133	Salmonella enterica
GCA_040151985.1	ABSWZC000000000	SAMN41788790	24MDARD151	Salmonella enterica
GCA_040151845.1	ABSWYZ000000000	SAMN41788771	24MDARD132	Salmonella enterica
GCA_040151945.1	ABSWZA000000000	SAMN41788789	24MDARD150	Salmonella enterica
GCA_040151765.1	ABSWYX000000000	SAMN41788788	24MDARD149	Salmonella enterica
GCA_040151785.1	ABSWZB000000000	SAMN41788787	24MDARD148	Salmonella enterica
GCA_040151725.1	ABSWYY000000000	SAMN41788786	24MDARD147	Salmonella enterica
GCA_040151745.1	ABSWYW000000000	SAMN41788785	24MDARD146	Salmonella enterica
GCA_040151665.1	ABSWYV000000000	SAMN41788784	24MDARD145	Salmonella enterica
GCA_040150295.1	ABSWYP000000000	SAMN41788782	24MDARD143	Salmonella enterica
GCA_040150265.1	ABSWYS000000000	SAMN41788781	24MDARD142	Salmonella enterica
GCA_040150215.1	ABSWYR000000000	SAMN41788770	24MDARD131	Salmonella enterica
GCA_040150175.1	ABSWYU000000000	SAMN41788780	24MDARD141	Salmonella enterica
GCA_040162085.1	ABSXBP000000000	SAMN41788777	24MDARD138	Salmonella enterica
GCA_040162065.1	ABSXBM000000000	SAMN41788775	24MDARD136	Salmonella enterica
GCA_040162045.1	ABSXBN000000000	SAMN41788776	24MDARD137	Salmonella enterica
GCA_040162025.1	ABSXBO000000000	SAMN41788773	24MDARD134	Salmonella enterica
GCA_040162005.1	ABSXBL000000000	SAMN41788783	24MDARD144	Salmonella enterica
GCA_040162105.1	ABSXBQ000000000	SAMN41788778	24MDARD139	Salmonella enterica
GCA_040150145.1	ABSWYO000000000	SAMN41788779	24MDARD140	Salmonella enterica
GCA_040150085.1	ABSWYQ000000000	SAMN41788769	24MDARD130	Salmonella enterica
GCA_006946125.1	AAGRPJ000000000	SAMN06294839	14FMPE000162	Salmonella enterica
GCA_006946105.1	AAGRPN000000000	SAMN06277404	12FMFO000301	Salmonella enterica
GCA_006972345.1	AAGTKR000000000	SAMN06477702	MDP10-00022	Salmonella enterica
GCA_006955505.1	AAGSGE000000000	SAMN06277403	12FMFO000396	Salmonella enterica
GCA_010177375.1	AANGBJ000000000	SAMN08163899	TW18144	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_010134595.1	AANFBK000000000	SAMN08163795	TW18115	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_010951235.1	AAPCIT000000000	SAMN08163888	TW18145	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_011515485.1	AAQFPK000000000	SAMN08163911	TW18146	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_009589245.1	AANAGS000000000	SAMN08163794	TW18100	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_009589065.1	AANAGQ000000000	SAMN08163938	TW18107	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_009588365.1	AANAGO000000000	SAMN08163881	TW18096	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_009588285.1	AANAGN000000000	SAMN08163878	TW18097	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_009588205.1	AANAGM000000000	SAMN08163876	TW18098	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_009588005.1	AANAGL000000000	SAMN08163906	TW18099	Salmonella enterica subsp. enterica serovar Enteritidis

SRA Data Details

Parameter	Value
Data volume, Gbases	86
Data volume, Mbytes	53136

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Salmonella enterica

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development

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