Campylobacter jejuni (ID 368990) - BioProject

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Accession: PRJNA368990 ID: 368990

Campylobacter jejuni

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development Geagley Laboratory

See Genome Information for Campylobacter jejuni

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This project is a component of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli

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633 additional projects are related by organism.

31 additional projects are components of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli.

Whole genome sequencing of cultured Campylobacter jejuni as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA368990
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Campylobacter jejuni[Taxonomy ID: 197] Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter jejuni
Submission	Registration date: 23-Apr-2019 FDA
Related Resources	Michigan Department of Agriculture and Rural Development \| Geagley Laboratory
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	63
SRA Experiments	69
Other datasets
BioSample	67
Assembly	63

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

63
63

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_005926635.1	AAECIQ000000000	SAMN11845849	TW19267-1	Campylobacter jejuni
GCA_005926615.1	AAECIU000000000	SAMN11845846	TW19274-2	Campylobacter jejuni
GCA_005926595.1	AAECIO000000000	SAMN11845845	TW19153-1	Campylobacter jejuni
GCA_005926555.1	AAECIS000000000	SAMN11845848	TW19258-3	Campylobacter jejuni
GCA_005871835.1	AADZPO000000000	SAMN11785417	TW16689-1	Campylobacter jejuni
GCA_004852565.1	AABKCL000000000	SAMN10506110	TW19290-1-1	Campylobacter jejuni
GCA_004828925.1	AABIQN000000000	SAMN10506152	TW19272-1	Campylobacter jejuni
GCA_004828845.1	AABIQM000000000	SAMN10506176	TW19281-2	Campylobacter jejuni
GCA_004828825.1	AABIQO000000000	SAMN10506175	TW19279-3	Campylobacter jejuni
GCA_004829305.1	AABISB000000000	SAMN10506165	TW19266-1	Campylobacter jejuni
GCA_004835525.1	AABIWV000000000	SAMN10506167	TW19122-1	Campylobacter jejuni
GCA_004835485.1	AABIWW000000000	SAMN10506164	TW19322	Campylobacter jejuni
GCA_004835985.1	AABIXO000000000	SAMN10506171	TW19108-2	Campylobacter jejuni
GCA_004845565.1	AABJPY000000000	SAMN10506156	TW19303-1	Campylobacter jejuni
GCA_004847805.1	AABJWR000000000	SAMN10734826	TW19276-3	Campylobacter jejuni
GCA_004848065.1	AABJXK000000000	SAMN10506163	TW19321	Campylobacter jejuni
GCA_004848305.1	AABJXV000000000	SAMN10506068	TW19317	Campylobacter jejuni
GCA_004848285.1	AABJXU000000000	SAMN10506057	TW19316	Campylobacter jejuni
GCA_004848215.1	AABJXP000000000	SAMN10506154	TW19320	Campylobacter jejuni
GCA_004848195.1	AABJXS000000000	SAMN10506186	TW19308	Campylobacter jejuni
GCA_004848165.1	AABJXN000000000	SAMN10506070	TW19318	Campylobacter jejuni
GCA_004848155.1	AABJXO000000000	SAMN10506185	TW19315	Campylobacter jejuni
GCA_004848125.1	AABJXM000000000	SAMN10506059	TW19309	Campylobacter jejuni
GCA_004849485.1	AABJXQ000000000	SAMN10506177	TW19319-1	Campylobacter jejuni
GCA_004849725.1	AABJXT000000000	SAMN10506178	TW19314	Campylobacter jejuni
GCA_004844305.1	AABJPX000000000	SAMN10506181	TW19306	Campylobacter jejuni
GCA_004844845.1	AABJPW000000000	SAMN10506168	TW19299-1	Campylobacter jejuni
GCA_004845525.1	AABJQA000000000	SAMN10506073	TW19288-1	Campylobacter jejuni
GCA_004845505.1	AABJPV000000000	SAMN10506077	TW19293-1	Campylobacter jejuni
GCA_004845485.1	AABJPZ000000000	SAMN10506133	TW19300-1	Campylobacter jejuni
GCA_004839425.1	AABJFF000000000	SAMN10506180	TW19291-2	Campylobacter jejuni
GCA_004839405.1	AABJFD000000000	SAMN10506069	TW19144-1	Campylobacter jejuni
GCA_004839965.1	AABJFC000000000	SAMN10506188	TW19128-1	Campylobacter jejuni
GCA_004840025.1	AABJFE000000000	SAMN10506132	TW19151-1	Campylobacter jejuni
GCA_004840185.1	AABJEZ000000000	SAMN10506055	TW19126-1	Campylobacter jejuni
GCA_004840285.1	AABJFA000000000	SAMN10506109	TW19125-1	Campylobacter jejuni
GCA_004904915.1	AABNXB000000000	SAMN10506137	TW19296-1	Campylobacter jejuni
GCA_004905115.1	AABNWV000000000	SAMN10506065	TW19292-1	Campylobacter jejuni
GCA_004905875.1	AABNWY000000000	SAMN10506162	TW19297-1	Campylobacter jejuni
GCA_004905975.1	AABNXC000000000	SAMN10506136	TW19295-1	Campylobacter jejuni
GCA_004905955.1	AABNXD000000000	SAMN10506147	TW19302	Campylobacter jejuni
GCA_004905935.1	AABNXJ000000000	SAMN10506184	TW19307	Campylobacter jejuni
GCA_004916575.1	AABMVV000000000	SAMN10506071	TW19311	Campylobacter jejuni
GCA_004890575.1	AABMVG000000000	SAMN10506066	TW19140-1	Campylobacter jejuni
GCA_004890555.1	AABMVH000000000	SAMN10506172	TW19298-3	Campylobacter jejuni
GCA_004890915.1	AABMVY000000000	SAMN10506063	TW19310	Campylobacter jejuni
GCA_004890895.1	AABMWB000000000	SAMN10506111	TW19313	Campylobacter jejuni
GCA_004893175.1	AABNCP000000000	SAMN10506076	TW19252-1	Campylobacter jejuni
GCA_004894895.1	AABMVX000000000	SAMN10506074	TW19312	Campylobacter jejuni
GCA_004897715.1	AABNFT000000000	SAMN10506166	TW19323	Campylobacter jejuni
GCA_004897875.1	AABNGC000000000	SAMN10506160	TW19100-1	Campylobacter jejuni
GCA_004905635.1	AABNXA000000000	SAMN10506067	TW19294-1	Campylobacter jejuni
GCA_004904575.1	AABNWZ000000000	SAMN10506144	TW19301-1	Campylobacter jejuni
GCA_004904295.1	AABNZA000000000	SAMN10506129	TW19149-1	Campylobacter jejuni
GCA_004827705.1	AABIQR000000000	SAMN10506138	TW19270-1	Campylobacter jejuni
GCA_004827945.1	AABIRX000000000	SAMN10506148	TW19269-2	Campylobacter jejuni
GCA_004828035.1	AABIQS000000000	SAMN10506141	TW19271-1	Campylobacter jejuni
GCA_004828125.1	AABIQP000000000	SAMN10506174	TW19278-2	Campylobacter jejuni
GCA_004828065.1	AABIQQ000000000	SAMN10506159	TW19277-2	Campylobacter jejuni
GCA_004828525.1	AABIRY000000000	SAMN10506078	TW19259-1	Campylobacter jejuni
GCA_005871875.2	AADZPK000000000	SAMN11785415	TW19123-2	Campylobacter jejuni
GCA_005871815.2	AADZPX000000000	SAMN11785419	TW19242-1	Campylobacter jejuni
GCA_005872895.2	AADZOR000000000	SAMN11784736	TW19152-1	Campylobacter jejuni

SRA Data Details

Parameter	Value
Data volume, Gbases	29
Data volume, Mbytes	16706

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Campylobacter jejuni

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development Geagley Laboratory

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