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Accession: PRJNA379008 ID: 379008

Mus musculus (house mouse)

ChIP-seq analysis of CTCF in distal limbs at mouse E12.5 using anti-CTCF

See Genome Information for Mus musculus
We performed ChIP-seq for CTCF using the autopod from E12.5 embryo and confirmed the binding pattern previously reported by a ChIP-on-Chip approach using the same embryonic tissue (Soshnikova et al. More...
AccessionPRJNA379008; GEO: GSE96558
Data TypeEpigenomics
ScopeMonoisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsFabre PJ et al., "Large scale genomic reorganization of topological domains at the HoxD locus.", Genome Biol, 2017 Aug 7;18(1):149
SubmissionRegistration date: 13-Mar-2017
Laboratory of Developmental Genomics, ISREC, EPFL
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes538
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes5109

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    ChIP-seq analysis of CTCF in distal limbs at mouse E12.5 using anti-CTCF
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