Bacteria (ID 379934) - BioProject

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Accession: PRJNA379934 ID: 379934

Bacteria

ATCC bacterial species genome sequencing and assembly

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This project is a component of the The Lactobacillus genus, a use case for Bactopia.

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216 additional projects are components of the The Lactobacillus genus, a use case for Bactopia..

Complete genomes for a subset of type strains in the ATCC collection

Accession	PRJNA379934
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 21-Mar-2017 Loyola University Chicago
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	586
WGS master	10
SRA Experiments	10
Protein Sequences	27565
Other datasets
BioSample	10
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

9
1
10

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_002087935.1	NARE00000000		SAMN06624124	ATCC 51268	Aerococcus urinae
GCA_002088065.1	NAQY00000000		SAMN06624014	ATCC BAA-2128	Enterococcus faecalis
GCA_002087945.1	NARF00000000		SAMN06624120	ATCC 29425	Escherichia coli
GCA_002087985.1	NARG00000000	1	SAMN06624121	ATCC 10798	Escherichia coli
GCA_002088015.1	NARH00000000		SAMN06624125	ATCC 33820	Lactobacillus crispatus
GCA_002088075.1	NAQZ00000000		SAMN06624127	ATCC 12698	Micrococcus luteus
GCA_002088085.1	NARA00000000	3	SAMN06624122	ATCC 14458	Staphylococcus aureus
GCA_002088055.1	NARB00000000	1	SAMN06624119	ATCC 27217	Staphylococcus aureus
GCA_002087975.1	NARC00000000	1	SAMN06624123	ATCC 14990	Staphylococcus epidermidis
GCA_002088025.1	NARD00000000		SAMN06624126	ATCC 33397	Streptococcus anginosus SK52 = DSM 20563

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	4075

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LinkOut to external resources

SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
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