The rat illeum bacterium Romboutsia ilealis CRIB was sequenced and assembled, using a hybrid approach, consisting out of different data types (Illumina paired end, mate pair, PacBio), as well as a custom assembly workflow.
| Accession | PRJEB4727 |
| Scope | Monoisolate |
| Organism | Romboutsia ilealis[Taxonomy ID: 1115758] Bacteria; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia ilealis |
| Publications | Gerritsen J et al., "Correlation between protection against sepsis by probiotic therapy and stimulation of a novel bacterial phylotype.", Appl Environ Microbiol, 2011 Nov;77(21):7749-56 |
| Submission | Registration date: 1-Apr-2017
Wageningen University |
| Locus Tag Prefix | CRIB |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (Genomic DNA) | 2 |
| SRA Experiments | 16 |
| Protein Sequences | 2347 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 16 |
| Assembly | 1 |