This study is a genomic comparison among phenotypically distinct species of Sporophila seedeaters. The general objective is to scan the genome for loci that are differentiated among species.
| Accession | PRJNA382416 |
| Data Type | Genome sequencing and assembly |
| Scope | Multispecies |
| Publications (total 6) Less... | - Campagna L et al., "Repeated divergent selection on pigmentation genes in a rapid finch radiation.", Sci Adv, 2017 May;3(5):e1602404
More...- Campagna L et al., "Repeated divergent selection on pigmentation genes in a rapid finch radiation.", Sci Adv, 2017 May;3(5):e1602404
- Published online: Turbek S et al., "Rapid speciation via the evolution of pre-mating isolation in the Iberá Seedeater", Science, 2021;371(6536)
- Published online: Hejase H et al., "Genomic islands of differentiation in a rapid avian radiation have been driven by recent selective sweeps", Proceedings of the National Academy of Sciences, 2020;117(48):30554-30565
- Published online: Turbek S et al., "Variable Signatures of Selection Despite Conserved Recombination Landscapes Early in Speciation", Journal of Heredity, 2021;112(6):485-496
- Published online: Estalles C et al., "Concerted variation in melanogenesis genes underlies emergent patterning of plumage in capuchino seedeaters", Proceedings of the Royal Society B: Biological Sciences, 2022;289(1966)
- Published online: Hejase H et al., "A Deep-Learning Approach for Inference of Selective Sweeps from the Ancestral Recombination Graph", Molecular Biology and Evolution, 2021;39(1)
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| Grants | - "RAPID PHENOTYPIC EVOLUTION THROUGH THE RESHUFFLING OF PIGMENTATION GENES" (Grant ID DEB-2232929, National Science Foundation)
- "Quantifying genomic porosity in non-model radiations" (Grant ID DEB â?? 1555754, National Science Foundation)
- "Análisis filogenómico de especies incipientes de aves neotropicales: Estudio de la contribución de la selección en el proceso de especiación" (Grant ID PICT 2014-2154, Agencia Nacional de Promoción CientÃfica y Tecnológica)
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| Submission | Registration date: 10-Apr-2017
Cornell University |
| Relevance | Evolution |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (WGS master) | 1 |
| SRA Experiments | 161 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 162 |
| Assembly | 1 |