Bacteria (ID 387187) - BioProject

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Accession: PRJNA387187 ID: 387187

Bacteria

Cheese rind isolates Genome sequencing and assembly

Bacterial isolates from cheese rinds from the US and Europe

Accession	PRJNA387187
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Bonham KS et al., "Extensive horizontal gene transfer in cheese-associated bacteria.", Elife, 2017 Jun 23;6 Published online: "Extensive Horizontal Gene Transfer in Cheese-Associated Bacteria", NA, 2017;NA(NA):NA-NA
Submission	Registration date: 5-Sep-2017 Dutton Lab, UCSD
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1507
WGS master	27
Protein Sequences	93812
Publications
PubMed	1
PMC	1
Other datasets
BioSample	29
Assembly	27

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

19
8
27

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003335415.1	QPGH00000000	SAMN07141160	876_9	Brachybacterium alimentarium
GCA_003335315.1	QPGG00000000	SAMN07141159	862_8	Brachybacterium alimentarium
GCA_003335295.1	QPGK00000000	SAMN07141164	962_10	Brachybacterium alimentarium
GCA_003335305.1	QPGI00000000	SAMN07141161	900_8	Brachybacterium alimentarium
GCA_003335265.1	QPGJ00000000	SAMN07141163	947_11	Brachybacterium alimentarium
GCA_003335355.1	QPGF00000000	SAMN07141158	738_10	Brachybacterium alimentarium
GCA_002332425.1	NRGS00000000	SAMN07141162	908_11	Brachybacterium alimentarium
GCA_002332305.1	NRGR00000000	SAMN07141157	341_9	Brachybacterium alimentarium
GCA_003335205.1	QPGN00000000	SAMN07141172	JB7	Brachybacterium sp. JB7
GCA_002332395.1	NRGP00000000	SAMN07141155	947_7	Brevibacterium aurantiacum
GCA_002332365.1	NRHA00000000	SAMN07141150	738_8	Brevibacterium aurantiacum
GCA_002332335.1	NRGO00000000	SAMN07141153	900_6	Brevibacterium aurantiacum
GCA_002332325.1	NRGQ00000000	SAMN07141156	962_8	Brevibacterium aurantiacum
GCA_002332445.1	NRHB00000000	SAMN07141149	341_13	Brevibacterium aurantiacum
GCA_002332225.1	NRGX00000000	SAMN07141170	JB5	Brevibacterium aurantiacum
GCA_003335395.1	QPGE00000000	SAMN07141154	908_7	Brevibacterium aurantiacum
GCA_003335435.1	QPGC00000000	SAMN07141151	862_7	Brevibacterium aurantiacum
GCA_003335365.1	QPGD00000000	SAMN07141152	876_7	Brevibacterium aurantiacum
GCA_002878675.1	PNQX00000000	SAMN07141175	JB182	Glutamicibacter arilaitensis
GCA_002332285.1	NRGT00000000	SAMN07141165	BW77	Glutamicibacter sp. BW77
GCA_002332245.1	NRGU00000000	SAMN07141166	BW78	Glutamicibacter sp. BW78
GCA_002332385.1	NRGV00000000	SAMN07141167	BW80	Glutamicibacter sp. BW80
GCA_002332255.1	NRGW00000000	SAMN07141169	JB37	Halomonas sp. JB37
GCA_003335195.1	QPGM00000000	SAMN07141168	JB110	Microbacterium sp. JB110
GCA_002332205.1	NRGZ00000000	SAMN07141177	JB197	Pseudoalteromonas sp. JB197
GCA_002285555.1	NRGY00000000	SAMN07141171	JB193	Psychrobacter sp. JB193
GCA_003335255.1	QPGL00000000	SAMN07141174	JB196	Vibrio casei

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Cheese rind isolates Genome sequencing and assembly

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