PRJNA323062 | SRA or Trace | Acetitomaculum ruminis DSM 5522 | Acetitomaculum ruminis DSM 5522 genome sequencing (DOE Joint Genome Institute) |
PRJNA254891 | SRA or Trace | Acidaminococcus fermentans | Acidaminococcus fermentans strain:pGA-4 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323320 | SRA or Trace | Acidaminococcus fermentans | Acidaminococcus fermentens WCC6 genome sequencing (DOE Joint Genome Institute) |
PRJNA323321 | SRA or Trace | Acinetobacter sp. DSM 11652 | Acinetobacter sp. DSM 11652 isolate:DSM 11652 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323063 | SRA or Trace | Actinomyces denticolens | Actinomyces denticolens PA genome sequencing (DOE Joint Genome Institute) |
PRJNA303222 | SRA or Trace | Actinomyces ruminicola | Actinomyces ruminicola KPR-7B genome sequencing (DOE Joint Genome Institute) |
PRJNA323060 | SRA or Trace | Actinomyces ruminicola | Actinomyces ruminicola DSM 27982 genome sequencing (DOE Joint Genome Institute) |
PRJNA254896 | SRA or Trace | Allisonella histaminiformans | Allisonella histaminiformans strain:DSM 15230 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223444 | Scaffolds | Anaerotruncus sp. MC2020 | Anaerotruncus sp. MC2020 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223047 | Scaffolds | Anaerovibrio lipolyticus LB2005 | Anaerovibrio lipolyticus LB2005 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223479 | Scaffolds | Anaerovibrio sp. RM50 | Anaerovibrio sp. RM50 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA370724 | SRA or Trace | Aristaeella hokkaidonensis | Aristaeella hokkaidonensis R-7 genome sequencing (DOE Joint Genome Institute) |
PRJNA370719 | SRA or Trace | Aristaeella lactis | Aristaeella lactis WTE2008 genome sequencing (DOE Joint Genome Institute) |
PRJNA303221 | SRA or Trace | Bacillus cereus | Bacillus cereus KPR-7A genome sequencing (DOE Joint Genome Institute) |
PRJNA303378 | SRA or Trace | Bacillus licheniformis | Bacillus licheniformis VTM3R78 genome sequencing (DOE Joint Genome Institute) |
PRJNA223041 | Scaffolds | Bacillus sp. MB2021 | Bacillus sp. MB2021 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323322 | SRA or Trace | Bacteroidales bacterium KHT7 | Bacteroidales bacterium KHT7 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370731 | SRA or Trace | Bacteroidales bacterium WCE2004 | Bacteroidales bacterium WCE2004 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370732 | SRA or Trace | Bacteroidales bacterium WCE2008 | Bacteroidales bacterium WCE2008 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323065 | SRA or Trace | Bacteroides ovatus | Bacteroides ovatus NLAE-zl-C57 genome sequencing (DOE Joint Genome Institute) |
PRJNA323064 | SRA or Trace | Bacteroides ovatus | Bacteroides ovatus NLAE-zl-C500 genome sequencing (DOE Joint Genome Institute) |
PRJNA254898 | SRA or Trace | Bacteroides sp. AR20 | Bacteroides sp. AR20 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254899 | SRA or Trace | Bacteroides sp. AR29 | Bacteroides sp. AR29 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223498 | Scaffolds | Bacteroides sp. Ga6A1 | Bacteroides sp. Ga6A1 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223492 | Scaffolds | Bacteroides sp. Ga6A2 | Bacteroides sp. Ga6A2 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254892 | SRA or Trace | Bacteroides thetaiotaomicron | Bacteroides thetaiotaomicron strain:KPPR-3 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323066 | SRA or Trace | Bacteroides thetaiotaomicron | Bacteroides thetaiotaomicron NLAE-zl-C579 genome sequencing (DOE Joint Genome Institute) |
PRJNA303302 | SRA or Trace | Bacteroides xylanisolvens | Bacteroides xylanisolvens NLAE-zl-G339 genome sequencing (DOE Joint Genome Institute) |
PRJNA323067 | SRA or Trace | Bacteroides xylanisolvens | Bacteroides xylanisolvens NLAE-zl-C202 genome sequencing (DOE Joint Genome Institute) |
PRJNA254895 | SRA or Trace | Basfia succiniciproducens | Basfia succiniciproducens strain:DSM 22022 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254910 | SRA or Trace | Basfia succiniciproducens | Basfia succiniciproducens strain:KPR-2 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223463 | Contigs | Bifidobacterium adolescentis DSM 20087 | Bifidobacterium adolescentis DSM 20087 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323068 | SRA or Trace | Bifidobacterium bifidum | Bifidobacterium bifidum Calf96 genome sequencing (DOE Joint Genome Institute) |
PRJNA223490 | Scaffolds | Bifidobacterium boum DSM 20432 | Bifidobacterium boum DSM 20432 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323308 | SRA or Trace | Bifidobacterium breve | Bifidobacterium breve RP2 genome sequencing (DOE Joint Genome Institute) |
PRJNA185722 | Contigs | Bifidobacterium longum AGR2137 | Bifidobacterium longum AGR2137 (DOE Joint Genome Institute) |
PRJNA223485 | SRA or Trace | Bifidobacterium merycicum DSM 6492 | Bifidobacterium merycicum DSM 6492 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185720 | Contigs | Bifidobacterium pseudolongum AGR2145 | Bifidobacterium pseudolongum AGR2145 (DOE Joint Genome Institute) |
PRJNA223493 | Contigs | Bifidobacterium pseudolongum subsp. globosum DSM 20092 | Bifidobacterium pseudolongum subsp. globosum DSM 20092 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223488 | Contigs | Bifidobacterium ruminantium DSM 6489 | Bifidobacterium ruminantium DSM 6489 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185699 | Scaffolds | Bifidobacterium sp. AGR2158 | Bifidobacterium sp. AGR2158 (DOE Joint Genome Institute) |
PRJNA223494 | Contigs | Bifidobacterium thermophilum DSM 20212 | Bifidobacterium thermophilum DSM 20212 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223460 | Scaffolds | Blautia schinkii DSM 10518 | Blautia schinkii DSM 10518 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254897 | SRA or Trace | Blautia sp. SF-50 | Blautia sp. SF-50 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185692 | Scaffolds | Blautia wexlerae AGR2146 | Blautia wexlerae AGR2146 (DOE Joint Genome Institute) |
PRJNA254890 | SRA or Trace | Bowdeniella nasicola | Bowdeniella nasicola strain:KPR-1 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303377 | SRA or Trace | Butyrivibrio fibrisolvens | Butyrivibrio fibrisolvens AR40 genome sequencing (DOE Joint Genome Institute) |
PRJNA185709 | Contigs | Butyrivibrio fibrisolvens AB2020 | Butyrivibrio fibrisolvens AB2020 (DOE Joint Genome Institute) |
PRJNA185717 | Scaffolds | Butyrivibrio fibrisolvens FE2007 | Butyrivibrio fibrisolvens FE2007 (DOE Joint Genome Institute) |
PRJNA185728 | Scaffolds | Butyrivibrio fibrisolvens MD2001 | Butyrivibrio fibrisolvens MD2001 (DOE Joint Genome Institute) |
PRJNA185708 | Contigs | Butyrivibrio fibrisolvens ND3005 | Butyrivibrio fibrisolvens ND3005 (DOE Joint Genome Institute) |
PRJNA185716 | Scaffolds | Butyrivibrio fibrisolvens WTE3004 | Butyrivibrio fibrisolvens WTE3004 (DOE Joint Genome Institute) |
PRJNA185684 | Scaffolds | Butyrivibrio fibrisolvens YRB2005 | Butyrivibrio fibrisolvens YRB2005 (DOE Joint Genome Institute) |
PRJNA254909 | SRA or Trace | Butyrivibrio hungatei | Butyrivibrio hungatei strain:XBD2006 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185721 | Scaffolds | Butyrivibrio hungatei NK4A153 | Butyrivibrio hungatei NK4A153 (DOE Joint Genome Institute) |
PRJNA303298 | SRA or Trace | Butyrivibrio proteoclasticus | Butyrivibrio proteoclasticus P18 genome sequencing (DOE Joint Genome Institute) |
PRJNA223016 | Scaffolds | Butyrivibrio proteoclasticus FD2007 | Butyrivibrio proteoclasticus FD2007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223495 | Scaffolds | Butyrivibrio proteoclasticus P6B7 | Butyrivibrio proteoclasticus P6B7 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185695 | Scaffolds | Butyrivibrio sp. AC2005 | Butyrivibrio sp. AC2005 (DOE Joint Genome Institute) |
PRJNA185689 | Contigs | Butyrivibrio sp. AD3002 | Butyrivibrio sp. AD3002 (DOE Joint Genome Institute) |
PRJNA243945 | Scaffolds | Butyrivibrio sp. AE2005 | Butyrivibrio sp. AE2005 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185678 | Contigs | Butyrivibrio sp. AE2015 | Butyrivibrio sp. AE2015 (DOE Joint Genome Institute) |
PRJNA237252 | Contigs | Butyrivibrio sp. AE2032 | Butyrivibrio sp. AE2032 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239505 | Contigs | Butyrivibrio sp. AE3003 | Butyrivibrio sp. AE3003 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239125 | Contigs | Butyrivibrio sp. AE3004 | Butyrivibrio sp. AE3004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185696 | Scaffolds | Butyrivibrio sp. AE3006 | Butyrivibrio sp. AE3006 (DOE Joint Genome Institute) |
PRJNA185681 | Contigs | Butyrivibrio sp. AE3009 | Butyrivibrio sp. AE3009 (DOE Joint Genome Institute) |
PRJNA185694 | Scaffolds | Butyrivibrio sp. FC2001 | Butyrivibrio sp. FC2001 (DOE Joint Genome Institute) |
PRJNA185726 | Scaffolds | Butyrivibrio sp. FCS006 | Butyrivibrio sp. FCS006 (DOE Joint Genome Institute) |
PRJNA223149 | Contigs | Butyrivibrio sp. FCS014 | Butyrivibrio sp. FCS014 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254902 | SRA or Trace | Butyrivibrio sp. INlla14 | Butyrivibrio sp. INlla14 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254901 | SRA or Trace | Butyrivibrio sp. INlla16 | Butyrivibrio sp. INlla16 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254900 | SRA or Trace | Butyrivibrio sp. INlla18 | Butyrivibrio sp. INlla18 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254905 | SRA or Trace | Butyrivibrio sp. INlla21 | Butyrivibrio sp. INlla21 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223048 | Scaffolds | Butyrivibrio sp. LB2008 | Butyrivibrio sp. LB2008 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185715 | Scaffolds | Butyrivibrio sp. LC3010 | Butyrivibrio sp. LC3010 (DOE Joint Genome Institute) |
PRJNA323309 | SRA or Trace | Butyrivibrio sp. M55 | Butyrivibrio sp. M55 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185703 | Scaffolds | Butyrivibrio sp. MB2005 | Butyrivibrio sp. MB2005 (DOE Joint Genome Institute) |
PRJNA185729 | Scaffolds | Butyrivibrio sp. MC2013 | Butyrivibrio sp. MC2013 (DOE Joint Genome Institute) |
PRJNA223051 | Scaffolds | Butyrivibrio sp. MC2021 | Butyrivibrio sp. MC2021 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223497 | Scaffolds | Butyrivibrio sp. NC2002 | Butyrivibrio sp. NC2002 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185725 | Contigs | Butyrivibrio sp. NC2007 | Butyrivibrio sp. NC2007 (DOE Joint Genome Institute) |
PRJNA185727 | Scaffolds | Butyrivibrio sp. NC3005 | Butyrivibrio sp. NC3005 (DOE Joint Genome Institute) |
PRJNA254904 | SRA or Trace | Butyrivibrio sp. Su6 | Butyrivibrio sp. Su6 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254903 | SRA or Trace | Butyrivibrio sp. TB | Butyrivibrio sp. TB strain:TB Genome sequencing (DOE Joint Genome Institute) |
PRJNA185682 | Scaffolds | Butyrivibrio sp. VCB2001 | Butyrivibrio sp. VCB2001 (DOE Joint Genome Institute) |
PRJNA185706 | Contigs | Butyrivibrio sp. VCB2006 | Butyrivibrio sp. VCB2006 (DOE Joint Genome Institute) |
PRJNA185679 | Scaffolds | Butyrivibrio sp. VCD2006 | Butyrivibrio sp. VCD2006 (DOE Joint Genome Institute) |
PRJNA185723 | Scaffolds | Butyrivibrio sp. WCD2001 | Butyrivibrio sp. WCD2001 (DOE Joint Genome Institute) |
PRJNA185701 | Scaffolds | Butyrivibrio sp. WCD3002 | Butyrivibrio sp. WCD3002 (DOE Joint Genome Institute) |
PRJNA223455 | Scaffolds | Butyrivibrio sp. WCE2006 | Butyrivibrio sp. WCE2006 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185724 | Scaffolds | Butyrivibrio sp. XBB1001 | Butyrivibrio sp. XBB1001 (DOE Joint Genome Institute) |
PRJNA185680 | Scaffolds | Butyrivibrio sp. XPD2002 | Butyrivibrio sp. XPD2002 (DOE Joint Genome Institute) |
PRJNA185683 | Contigs | Butyrivibrio sp. XPD2006 | Butyrivibrio sp. XPD2006 (DOE Joint Genome Institute) |
PRJNA254908 | SRA or Trace | Butyrivibrio sp. YAB3001 | Butyrivibrio sp. YAB3001 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303220 | SRA or Trace | Butyrivibrio sp. ob235 | Butyrivibrio sp. OB235 genome sequencing (DOE Joint Genome Institute) |
PRJNA323310 | SRA or Trace | Cellulomonas sp. KH9 | Cellulomonas sp. KH9 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323323 | SRA or Trace | Citrobacter sp. NLAE-zl-C269 | Citrobacter sp. NLAE-zl-C269 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185711 | Contigs | Clostridiales bacterium NK3B98 | Clostridiales bacterium NK3B98 (DOE Joint Genome Institute) |
PRJNA217198 | Contigs | Clostridioides mangenotii LM2 | Clostridioides mangenotii LM2 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239120 | Contigs | Clostridium algidicarnis | Clostridium algidicarnis strain:B3 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223437 | Scaffolds | Clostridium beijerinckii HUN142 | Clostridium beijerinckii HUN142 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185700 | Scaffolds | Clostridium butyricum AGR2140 | Clostridium butyricum AGR2140 (DOE Joint Genome Institute) |
PRJNA303376 | SRA or Trace | Clostridium cadaveris | Clostridium cadaveris NLAE-zl-G419 genome sequencing (DOE Joint Genome Institute) |
PRJNA185698 | Scaffolds | Clostridium cadaveris AGR2141 | Clostridium cadaveris AGR2141 (DOE Joint Genome Institute) |
PRJNA323311 | SRA or Trace | Clostridium cochlearium | Clostridium cochlearium NLAE-zl-C224 genome sequencing (DOE Joint Genome Institute) |
PRJNA223468 | Scaffolds | Clostridium lundense DSM 17049 | Clostridium lundense DSM 17049 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185687 | Scaffolds | Clostridium paraputrificum AGR2156 | Clostridium paraputrificum AGR2156 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303375 | SRA or Trace | Clostridium sp. dsm 8431 | Clostridium sp. DSM8431 genome sequencing (DOE Joint Genome Institute) |
PRJNA223486 | Scaffolds | Corynebacterium vitaeruminis Ga6A13 | Corynebacterium vitaeruminis Ga6A13 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323315 | SRA or Trace | Cutibacterium acnes | Propionibacterium acnes NLAE-zl-G260 genome sequencing (DOE Joint Genome Institute) |
PRJNA254911 | SRA or Trace | Denitrobacterium detoxificans | Denitrobacterium detoxificans strain:DSM 21843 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254913 | SRA or Trace | Desulfovibrio desulfuricans | Desulfovibrio desulfuricans strain:DSM 7057 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323313 | SRA or Trace | Desulfovibrio legallii | Desulfovibrio legallii KHC7 genome sequencing (DOE Joint Genome Institute) |
PRJNA185710 | Scaffolds | Dorea longicatena AGR2136 | Dorea longicatena AGR2136 (DOE Joint Genome Institute) |
PRJNA185686 | Contigs | Dorea sp. AGR2135 | Dorea sp. AGR2135 (DOE Joint Genome Institute) |
PRJNA303217 | SRA or Trace | Enterobacter sp. kpr-6 | Enterobacter sp. KPR-6 genome sequencing (DOE Joint Genome Institute) |
PRJNA323207 | SRA or Trace | Enterocloster citroniae | Lachnoclostridium citroniae NLAE-zl-G70 genome sequencing (DOE Joint Genome Institute) |
PRJNA254881 | SRA or Trace | Enterocloster clostridioformis | Enterocloster clostridioformis strain:ATCC 25537 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322952 | SRA or Trace | Enterocloster clostridioformis | Lachnoclostridium clostridioforme NLAE-zl-C196 genome sequencing (DOE Joint Genome Institute) |
PRJNA322953 | SRA or Trace | Enterocloster clostridioformis | Lachnoclostridium clostridioforme NLAE-zl-G208 genome sequencing (DOE Joint Genome Institute) |
PRJNA323208 | SRA or Trace | Enterocloster lavalensis | Lachnoclostridium lavalense NLAE-zl-G277 genome sequencing (DOE Joint Genome Institute) |
PRJNA303374 | SRA or Trace | Enterococcus casseliflavus | Enterococcus casseliflavus NLAE-zl-G268 genome sequencing (DOE Joint Genome Institute) |
PRJNA322949 | SRA or Trace | Enterococcus casseliflavus | Enterococcus casseliflavus NLAE-zl-C414 genome sequencing (DOE Joint Genome Institute) |
PRJNA303216 | SRA or Trace | Enterococcus faecalis | Enterococcus faecalis VTM1R91 genome sequencing (DOE Joint Genome Institute) |
PRJNA237253 | Contigs | Enterococcus faecalis 68A | Enterococcus faecalis 68A Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239493 | Contigs | Enterococcus gallinarum | Enterococcus gallinarum strain:SKF1 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303225 | SRA or Trace | Enterococcus mundtii | Enterococcus mundtii C2 genome sequencing (DOE Joint Genome Institute) |
PRJNA303215 | SRA or Trace | Enterococcus sp. kppr-6 | Enterococcus sp. KPPR-6 genome sequencing (DOE Joint Genome Institute) |
PRJNA223066 | Scaffolds | Erysipelotrichaceae bacterium NK3D112 | Erysipelotrichaceae bacterium NK3D112 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303214 | SRA or Trace | Escherichia coli | Escherichia coli PA-3 genome sequencing (DOE Joint Genome Institute) |
PRJNA303373 | SRA or Trace | Eubacterium callanderi | Eubacterium callanderi NLAE-zl-G225 genome sequencing (DOE Joint Genome Institute) |
PRJNA254843 | SRA or Trace | Eubacterium oxidoreducens | Eubacterium oxidoreducens strain:DSM 3217 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303372 | SRA or Trace | Eubacterium pyruvativorans | Eubacterium pyruvativorans i6 genome sequencing (DOE Joint Genome Institute) |
PRJNA323326 | SRA or Trace | Eubacterium pyruvativorans | Eubacterium pyruvativorans KHGC13 genome sequencing (DOE Joint Genome Institute) |
PRJNA323327 | SRA or Trace | Eubacterium pyruvativorans | Eubacterium pyruvativorans KHPC4 genome sequencing (DOE Joint Genome Institute) |
PRJNA303294 | SRA or Trace | Eubacterium ruminantium | Eubacterium ruminantium 2388 genome sequencing (DOE Joint Genome Institute) |
PRJNA303293 | SRA or Trace | Eubacterium ruminantium | Eubacterium ruminantium FB3002 genome sequencing (DOE Joint Genome Institute) |
PRJNA254842 | SRA or Trace | Eubacterium ruminantium | Eubacterium ruminantium strain:HUN269 Genome sequencing (DOE Joint Genome Institute) |
PRJNA217194 | Contigs | Eubacterium sp. AB3007 | Eubacterium sp. AB3007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322954 | Scaffolds | Faecalicatena contorta | Lachnoclostridium contortum NLAE-zl-C134 genome sequencing (DOE Joint Genome Institute) |
PRJNA322955 | Scaffolds | Faecalicatena orotica | Lachnoclostridium oroticum NLAE-zl-C242 genome sequencing (DOE Joint Genome Institute) |
PRJNA254841 | Scaffolds | Fibrobacter succinogenes subsp. elongatus | Fibrobacter succinogenes subsp. elongatus strain:HM2 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223481 | Scaffolds | Fusobacterium necrophorum HUN048 | Fusobacterium necrophorum HUN048 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322950 | SRA or Trace | Kandleria vitulina | Kandleria vitulina KH4T7 genome sequencing (DOE Joint Genome Institute) |
PRJNA322951 | SRA or Trace | Kandleria vitulina | Kandleria vitulina WCC7 genome sequencing (DOE Joint Genome Institute) |
PRJNA303224 | SRA or Trace | Kandleria vitulina | Kandleria vitulina S3b genome sequencing (DOE Joint Genome Institute) |
PRJNA223467 | Scaffolds | Kandleria vitulina DSM 20405 | Kandleria vitulina DSM 20405 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223501 | Scaffolds | Kandleria vitulina MC3001 | Kandleria vitulina MC3001 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223465 | Scaffolds | Kandleria vitulina WCE2011 | Kandleria vitulina WCE2011 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239496 | Contigs | Lachnobacterium bovis | Lachnobacterium bovis strain:AE2004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254846 | SRA or Trace | Lachnobacterium bovis | Lachnobacterium bovis strain:S1b Genome sequencing (DOE Joint Genome Institute) |
PRJNA223489 | Scaffolds | Lachnobacterium bovis C6A12 | Lachnobacterium bovis C6A12 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254912 | SRA or Trace | Lachnobacterium bovis DSM 14045 | Lachnobacterium bovis DSM 14045 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185713 | Contigs | Lachnobacterium bovis NK4B19 | Lachnobacterium bovis NK4B19 (DOE Joint Genome Institute) |
PRJNA322956 | SRA or Trace | Lachnospira multipara | Lachnospira multipara D15d genome sequencing (DOE Joint Genome Institute) |
PRJNA185693 | Scaffolds | Lachnospira multipara ATCC 19207 | Lachnospira multipara ATCC 19207 (DOE Joint Genome Institute) |
PRJNA223491 | Scaffolds | Lachnospira multipara LB2003 | Lachnospira multipara LB2003 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223474 | Scaffolds | Lachnospira multipara MC2003 | Lachnospira multipara MC2003 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322957 | SRA or Trace | Lachnospira pectinoschiza | Lachnospira pectinoschiza M83 genome sequencing (DOE Joint Genome Institute) |
PRJNA370721 | SRA or Trace | Lachnospiraceae bacterium | Lachnospiraceae bacterium strain:KH1P17 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370725 | SRA or Trace | Lachnospiraceae bacterium | Lachnospiraceae bacterium strain:LC2019 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254885 | SRA or Trace | Lachnospiraceae bacterium A10 | Lachnospiraceae bacterium A10 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223012 | Scaffolds | Lachnospiraceae bacterium AB2028 | Lachnospiraceae bacterium AB2028 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA217193 | Contigs | Lachnospiraceae bacterium AC2012 | Lachnospiraceae bacterium AC2012 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223008 | Scaffolds | Lachnospiraceae bacterium AC2014 | Lachnospiraceae bacterium AC2014 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223007 | Scaffolds | Lachnospiraceae bacterium AC2028 | Lachnospiraceae bacterium AC2028 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA237258 | Contigs | Lachnospiraceae bacterium AC2029 | Lachnospiraceae bacterium AC2029 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA217196 | Contigs | Lachnospiraceae bacterium AC2031 | Lachnospiraceae bacterium AC2031 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223011 | Scaffolds | Lachnospiraceae bacterium AC3007 | Lachnospiraceae bacterium AC3007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223480 | Scaffolds | Lachnospiraceae bacterium AD3010 | Lachnospiraceae bacterium AD3010 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254845 | SRA or Trace | Lachnospiraceae bacterium C10 | Lachnospiraceae bacterium C10 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223496 | Scaffolds | Lachnospiraceae bacterium C6A11 | Lachnospiraceae bacterium C6A11 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223476 | Scaffolds | Lachnospiraceae bacterium FD2005 | Lachnospiraceae bacterium FD2005 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223461 | Contigs | Lachnospiraceae bacterium FE2018 | Lachnospiraceae bacterium FE2018 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254844 | SRA or Trace | Lachnospiraceae bacterium G11 | Lachnospiraceae bacterium G11 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323329 | SRA or Trace | Lachnospiraceae bacterium KH1T2 | Lachnospiraceae bacterium KH1T2 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323330 | SRA or Trace | Lachnospiraceae bacterium KHCPX20 | Lachnospiraceae bacterium KHCPX20 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223040 | Scaffolds | Lachnospiraceae bacterium MA2020 | Lachnospiraceae bacterium MA2020 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223042 | Scaffolds | Lachnospiraceae bacterium MC2017 | Lachnospiraceae bacterium MC2017 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223499 | Scaffolds | Lachnospiraceae bacterium MD2004 | Lachnospiraceae bacterium MD2004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223464 | Scaffolds | Lachnospiraceae bacterium NC2004 | Lachnospiraceae bacterium NC2004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223482 | Contigs | Lachnospiraceae bacterium NC2008 | Lachnospiraceae bacterium NC2008 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223475 | Scaffolds | Lachnospiraceae bacterium ND2006 | Lachnospiraceae bacterium ND2006 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254848 | SRA or Trace | Lachnospiraceae bacterium NE2001 | Lachnospiraceae bacterium NE2001 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185688 | SRA or Trace | Lachnospiraceae bacterium NK3A20 | Lachnospiraceae bacterium NK3A20 (DOE Joint Genome Institute) |
PRJNA185705 | Contigs | Lachnospiraceae bacterium NK4A136 | Lachnospiraceae bacterium NK4A136 (DOE Joint Genome Institute) |
PRJNA185712 | Scaffolds | Lachnospiraceae bacterium NK4A144 | Lachnospiraceae bacterium NK4A144 (DOE Joint Genome Institute) |
PRJNA185714 | Contigs | Lachnospiraceae bacterium NK4A179 | Lachnospiraceae bacterium NK4A179 (DOE Joint Genome Institute) |
PRJNA323331 | SRA or Trace | Lachnospiraceae bacterium NLAE-zl-G231 | Lachnospiraceae bacterium NLAE-zl-G231 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223470 | Scaffolds | Lachnospiraceae bacterium P6A3 | Lachnospiraceae bacterium P6A3 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223466 | Contigs | Lachnospiraceae bacterium P6B14 | Lachnospiraceae bacterium P6B14 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254847 | SRA or Trace | Lachnospiraceae bacterium RM5 | Lachnospiraceae bacterium RM5 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223478 | Scaffolds | Lachnospiraceae bacterium V9D3004 | Lachnospiraceae bacterium V9D3004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254852 | SRA or Trace | Lachnospiraceae bacterium XBB1006 | Lachnospiraceae bacterium XBB1006 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254851 | SRA or Trace | Lachnospiraceae bacterium XBB2008 | Lachnospiraceae bacterium XBB2008 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254884 | SRA or Trace | Lachnospiraceae bacterium XBD2001 | Lachnospiraceae bacterium XBD2001 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254850 | SRA or Trace | Lachnospiraceae bacterium XPB1003 | Lachnospiraceae bacterium XPB1003 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223487 | Contigs | Lachnospiraceae bacterium YSB2008 | Lachnospiraceae bacterium YSB2008 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254855 | SRA or Trace | Lachnospiraceae bacterium YSD2013 | Lachnospiraceae bacterium YSD2013 Genome sequencing (DOE Joint Genome Institute) |
PRJNA310131 | SRA or Trace | Lachnospiraceae bacterium c7 | Lachnospiraceae bacterium c7 strain:c7 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303223 | SRA or Trace | Lachnospiraceae bacterium g41 | Lachnospiraceae bacterium G41 genome sequencing (DOE Joint Genome Institute) |
PRJNA239498 | Contigs | Lactiplantibacillus plantarum | Lactiplantibacillus plantarum strain:AG30 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322962 | SRA or Trace | Lactococcus garvieae | Lactococcus garvieae M79 genome sequencing (DOE Joint Genome Institute) |
PRJNA239124 | Contigs | Lactococcus lactis subsp. lactis | Lactococcus lactis subsp. lactis strain:511 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA214528 | Contigs | Levilactobacillus brevis AG48 | Levilactobacillus brevis AG48 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322961 | SRA or Trace | Ligilactobacillus ruminis | Ligilactobacillus sp. WC1T17 genome sequencing (DOE Joint Genome Institute) |
PRJNA254854 | SRA or Trace | Ligilactobacillus ruminis DSM 20403 = NBRC 102161 | Ligilactobacillus ruminis DSM 20403 = NBRC 102161 Genome sequencing (DOE Joint Genome Institute) |
PRJNA239121 | Contigs | Limosilactobacillus mucosae | Limosilactobacillus mucosae strain:AGR63 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322959 | SRA or Trace | Limosilactobacillus mucosae | Lactobacillus mucosae KHPX11 genome sequencing (DOE Joint Genome Institute) |
PRJNA322960 | SRA or Trace | Limosilactobacillus mucosae | Lactobacillus mucosae WCC8 genome sequencing (DOE Joint Genome Institute) |
PRJNA322958 | SRA or Trace | Limosilactobacillus mucosae | Lactobacillus mucosae KHPC15 genome sequencing (DOE Joint Genome Institute) |
PRJNA214525 | Contigs | Mediterraneibacter gnavus AGR2154 | Mediterraneibacter gnavus AGR2154 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323332 | SRA or Trace | Megamonas sp. Calf98-2 | Megamonas sp. Calf98-2 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254853 | SRA or Trace | Megasphaera elsdenii | Megasphaera elsdenii strain:YE34 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303556 | SRA or Trace | Megasphaera elsdenii | Megasphaera elsdenii J1 genome sequencing (DOE Joint Genome Institute) |
PRJNA223459 | Scaffolds | Megasphaera elsdenii T81 | Megasphaera elsdenii T81 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322963 | SRA or Trace | Methanobrevibacter gottschalkii | Methanobrevibacter gottschalkii DSM 11978 genome sequencing (DOE Joint Genome Institute) |
PRJNA254858 | SRA or Trace | Methanobrevibacter millerae | Methanobrevibacter millerae strain:DSM 16643 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254876 | SRA or Trace | Methanobrevibacter olleyae | Methanobrevibacter olleyae strain:DSM 16632 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223477 | Scaffolds | Methanobrevibacter wolinii SH | Methanobrevibacter wolinii SH strain:SH Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223456 | Contigs | Methanomicrobium mobile BP | Methanomicrobium mobile BP strain:BP Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254857 | SRA or Trace | Methanosarcina sp. DSM 11855 | Methanosarcina sp. DSM 11855 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370722 | SRA or Trace | Micrococcales bacterium KH10 | Micrococcales bacterium KH10 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303320 | SRA or Trace | Micrococcus luteus | Micrococcus luteus VTM4R57 genome sequencing (DOE Joint Genome Institute) |
PRJNA223472 | Contigs | Mitsuokella jalaludinii DSM 13811 | Mitsuokella jalaludinii DSM 13811 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322987 | SRA or Trace | Morganella morganii | Morganella morganii NLAE-zl-C84 genome sequencing (DOE Joint Genome Institute) |
PRJNA370720 | SRA or Trace | Olsenella sp. KH1P3 | Olsenella sp. KH1P3 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322927 | SRA or Trace | Olsenella sp. KH3B4 | Olsenella sp. KH3B4 genome sequencing (DOE Joint Genome Institute) |
PRJNA311386 | SRA or Trace | Olsenella sp. kh2p3 | Olsenella sp. kh2p3 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223049 | Scaffolds | Oribacterium sp. FC2011 | Oribacterium sp. FC2011 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322928 | SRA or Trace | Oribacterium sp. KHPX15 | Oribacterium sp. KHPX15 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185718 | Scaffolds | Oribacterium sp. NK2B42 | Oribacterium sp. NK2B42 (DOE Joint Genome Institute) |
PRJNA223469 | Contigs | Oribacterium sp. P6A1 | Oribacterium sp. P6A1 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322929 | SRA or Trace | Oribacterium sp. WCC10 | Oribacterium sp. WCC10 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323189 | SRA or Trace | Oscillibacter sp. PC13 | Oscillibacter sp. PC13 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370723 | SRA or Trace | Oscillospiraceae bacterium | Oscillospiraceae bacterium strain:KHP2 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303213 | SRA or Trace | Parafannyhessea umbonata | Olsenella umbonata DSM 22619 genome sequencing (DOE Joint Genome Institute) |
PRJNA322965 | SRA or Trace | Parafannyhessea umbonata | Olsenella umbonata WCP15 genome sequencing (DOE Joint Genome Institute) |
PRJNA322964 | SRA or Trace | Parafannyhessea umbonata | Olsenella umbonata KHGC19 genome sequencing (DOE Joint Genome Institute) |
PRJNA214531 | Contigs | Pediococcus acidilactici AGR20 | Pediococcus acidilactici AGR20 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA242133 | Contigs | Peptostreptococcaceae bacterium VA2 | Peptostreptococcaceae bacterium VA2 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254889 | SRA or Trace | Peptostreptococcaceae bacterium pGA-8 | Peptostreptococcaceae bacterium pGA-8 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254856 | SRA or Trace | Peptostreptococcus anaerobius | Peptostreptococcus anaerobius strain:C Genome sequencing (DOE Joint Genome Institute) |
PRJNA322966 | SRA or Trace | Peptostreptococcus russellii | Peptostreptococcus russellii Calf135 genome sequencing (DOE Joint Genome Institute) |
PRJNA254861 | SRA or Trace | Peptostreptococcus sp. D1 | Peptostreptococcus sp. D1 strain:D1 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303303 | SRA or Trace | Phocaeicola vulgatus | Bacteroides vulgatus NLAE-zl-G202 genome sequencing (DOE Joint Genome Institute) |
PRJNA322930 | SRA or Trace | Porphyromonadaceae bacterium KH3CP3RA | Porphyromonadaceae bacterium KH3CP3RA Genome sequencing (DOE Joint Genome Institute) |
PRJNA322931 | SRA or Trace | Porphyromonadaceae bacterium KH3R12 | Porphyromonadaceae bacterium KH3R12 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322932 | SRA or Trace | Porphyromonadaceae bacterium KHP3R9 | Porphyromonadaceae bacterium KHP3R9 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322933 | SRA or Trace | Porphyromonadaceae bacterium NLAE-zl-C104 | Porphyromonadaceae bacterium NLAE-zl-C104 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303337 | SRA or Trace | Prevotella aff. ruminicola Tc2-24 | Prevotella sp. TC2-24 genome sequencing (DOE Joint Genome Institute) |
PRJNA303339 | SRA or Trace | Prevotella communis | Prevotella sp. BP1-148 genome sequencing (DOE Joint Genome Institute) |
PRJNA303340 | SRA or Trace | Prevotella communis | Prevotella sp. BP1-145 genome sequencing (DOE Joint Genome Institute) |
PRJNA185697 | Scaffolds | Prevotella sp. AGR2160 | Prevotella sp. AGR2160 (DOE Joint Genome Institute) |
PRJNA223015 | Scaffolds | Prevotella sp. FD3004 | Prevotella sp. FD3004 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA217188 | Contigs | Prevotella sp. HUN102 | Prevotella sp. HUN102 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323314 | SRA or Trace | Prevotella sp. KH2C16 | Prevotella sp. KH2C16 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223052 | Scaffolds | Prevotella sp. MA2016 | Prevotella sp. MA2016 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223449 | Scaffolds | Prevotella sp. P6B1 | Prevotella sp. P6B1 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223445 | Scaffolds | Prevotella sp. P6B4 | Prevotella sp. P6B4 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223453 | Scaffolds | Prevotella sp. RM4 | Prevotella sp. RM4 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303212 | SRA or Trace | Prevotella sp. kh1p2 | Prevotella sp. KH1P2 genome sequencing (DOE Joint Genome Institute) |
PRJNA303211 | SRA or Trace | Prevotella sp. khp1 | Prevotella sp. KHP1 genome sequencing (DOE Joint Genome Institute) |
PRJNA303265 | SRA or Trace | Prevotella sp. khp7 | Prevotella sp. KHP7 genome sequencing (DOE Joint Genome Institute) |
PRJNA303264 | SRA or Trace | Prevotella sp. lc2012 | Prevotella sp. LC2012 genome sequencing (DOE Joint Genome Institute) |
PRJNA303338 | SRA or Trace | Prevotella sp. ne3005 | Prevotella sp. NE3005 genome sequencing (DOE Joint Genome Institute) |
PRJNA303336 | SRA or Trace | Prevotella sp. tc2-28 | Prevotella sp. TC2-28 genome sequencing (DOE Joint Genome Institute) |
PRJNA303335 | SRA or Trace | Prevotella sp. tf2-5 | Prevotella sp. TF2-5 genome sequencing (DOE Joint Genome Institute) |
PRJNA254860 | SRA or Trace | Prevotellaceae bacterium HUN156 | Prevotellaceae bacterium HUN156 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370726 | SRA or Trace | Prevotellaceae bacterium KH2P17 | Prevotellaceae bacterium KH2P17 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370727 | SRA or Trace | Prevotellaceae bacterium MN60 | Prevotellaceae bacterium MN60 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223447 | Scaffolds | Propionibacteriaceae bacterium P6A17 | Propionibacteriaceae bacterium P6A17 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223473 | Contigs | Propionibacterium sp. MB3007 | Propionibacterium sp. MB3007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223441 | Scaffolds | Proteiniclasticum ruminis DSM 24773 | Proteiniclasticum ruminis DSM 24773 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303334 | SRA or Trace | Proteus mirabilis | Proteus mirabilis NLAE-zl-G534 genome sequencing (DOE Joint Genome Institute) |
PRJNA323316 | SRA or Trace | Proteus mirabilis | Proteus mirabilis NLAE-zl-C285 genome sequencing (DOE Joint Genome Institute) |
PRJNA254917 | SRA or Trace | Pseudobutyrivibrio ruminis | Pseudobutyrivibrio ruminis strain:ACV-9 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185704 | Scaffolds | Pseudobutyrivibrio ruminis AD2017 | Pseudobutyrivibrio ruminis AD2017 (DOE Joint Genome Institute) |
PRJNA185685 | Scaffolds | Pseudobutyrivibrio ruminis CF1b | Pseudobutyrivibrio ruminis CF1b (DOE Joint Genome Institute) |
PRJNA254859 | SRA or Trace | Pseudobutyrivibrio ruminis DSM 9787 | Pseudobutyrivibrio ruminis DSM 9787 Genome sequencing (DOE Joint Genome Institute) |
PRJNA237255 | Contigs | Pseudobutyrivibrio ruminis HUN009 | Pseudobutyrivibrio ruminis HUN009 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA322934 | SRA or Trace | Pseudobutyrivibrio sp. 49 | Pseudobutyrivibrio sp. 49 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254888 | SRA or Trace | Pseudobutyrivibrio sp. ACV-2 | Pseudobutyrivibrio sp. ACV-2 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254864 | SRA or Trace | Pseudobutyrivibrio sp. AR14 | Pseudobutyrivibrio sp. AR14 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254863 | SRA or Trace | Pseudobutyrivibrio sp. C4 | Pseudobutyrivibrio sp. C4 strain:C4 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323192 | SRA or Trace | Pseudobutyrivibrio sp. JW11 | Pseudobutyrivibrio sp. JW11 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223068 | Scaffolds | Pseudobutyrivibrio sp. LB2011 | Pseudobutyrivibrio sp. LB2011 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223452 | Scaffolds | Pseudobutyrivibrio sp. MD2005 | Pseudobutyrivibrio sp. MD2005 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254862 | SRA or Trace | Pseudobutyrivibrio sp. YE44 | Pseudobutyrivibrio sp. YE44 Genome sequencing (DOE Joint Genome Institute) |
PRJNA311385 | SRA or Trace | Pseudobutyrivibrio sp. nor37 | Pseudobutyrivibrio sp. nor37 Genome sequencing (DOE Joint Genome Institute) |
PRJNA311407 | SRA or Trace | Pseudobutyrivibrio sp. or37 | Pseudobutyrivibrio sp. or37 Genome sequencing (DOE Joint Genome Institute) |
PRJNA311406 | SRA or Trace | Pseudobutyrivibrio sp. uc1225 | Pseudobutyrivibrio sp. uc1225 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254867 | SRA or Trace | Pseudobutyrivibrio xylanivorans | Pseudobutyrivibrio xylanivorans strain:DSM 10317 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370728 | SRA or Trace | Ruaniaceae bacterium KH17 | Ruaniaceae bacterium KH17 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254866 | SRA or Trace | Ruminobacter amylophilus | Ruminobacter amylophilus strain:DSM 1361 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223443 | Scaffolds | Ruminobacter sp. RM87 | Ruminobacter sp. RM87 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223440 | Scaffolds | Ruminococcaceae bacterium AB4001 | Ruminococcaceae bacterium AB4001 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA217189 | Contigs | Ruminococcaceae bacterium AE2021 | Ruminococcaceae bacterium AE2021 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254865 | SRA or Trace | Ruminococcaceae bacterium D5 | Ruminococcaceae bacterium D5 strain:D5 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254870 | SRA or Trace | Ruminococcaceae bacterium FB2012 | Ruminococcaceae bacterium FB2012 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322937 | SRA or Trace | Ruminococcaceae bacterium KH2T8 | Ruminococcaceae bacterium KH2T8 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254869 | SRA or Trace | Ruminococcaceae bacterium P7 | Ruminococcaceae bacterium P7 strain:P7 Genome sequencing (DOE Joint Genome Institute) |
PRJNA370729 | Contigs | Ruminococcaceae bacterium R-25 | Ruminococcaceae bacterium R-25 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254868 | SRA or Trace | Ruminococcaceae bacterium YAD3003 | Ruminococcaceae bacterium YAD3003 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254887 | SRA or Trace | Ruminococcaceae bacterium YRB3002 | Ruminococcaceae bacterium YRB3002 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254872 | SRA or Trace | Ruminococcus albus | Ruminococcus albus strain:AR67 Genome sequencing (DOE Joint Genome Institute) |
PRJNA322971 | SRA or Trace | Ruminococcus albus | Ruminococcus albus KH2T6 genome sequencing (DOE Joint Genome Institute) |
PRJNA214529 | Contigs | Ruminococcus albus AD2013 | Ruminococcus albus AD2013 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254871 | SRA or Trace | Ruminococcus bromii | Ruminococcus bromii strain:YE282 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303327 | SRA or Trace | Ruminococcus flavefaciens | Ruminococcus flavefaciens Y1 genome sequencing (DOE Joint Genome Institute) |
PRJNA254877 | Scaffolds | Ruminococcus flavefaciens | Ruminococcus flavefaciens strain:SAb67 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254875 | SRA or Trace | Ruminococcus flavefaciens | Ruminococcus flavefaciens strain:YAD2003 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254879 | SRA or Trace | Ruminococcus flavefaciens | Ruminococcus flavefaciens strain:YL228 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254878 | SRA or Trace | Ruminococcus flavefaciens | Ruminococcus flavefaciens strain:YRD2003 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303263 | SRA or Trace | Ruminococcus flavefaciens | Ruminococcus sp. XPD3002 genome sequencing (DOE Joint Genome Institute) |
PRJNA214530 | Contigs | Ruminococcus flavefaciens AE3010 | Ruminococcus flavefaciens AE3010 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223451 | Scaffolds | Ruminococcus flavefaciens MA2007 | Ruminococcus flavefaciens MA2007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223442 | Scaffolds | Ruminococcus flavefaciens ND2009 | Ruminococcus flavefaciens ND2009 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223448 | Scaffolds | Ruminococcus sp. FC2018 | Ruminococcus sp. FC2018 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239502 | Contigs | Ruminococcus sp. HUN007 | Ruminococcus sp. HUN007 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239510 | Contigs | Ruminococcus sp. NK3A76 | Ruminococcus sp. NK3A76 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254880 | SRA or Trace | Ruminococcus sp. YE71 | Ruminococcus sp. YE71 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254883 | SRA or Trace | Ruminococcus sp. YE78 | Ruminococcus sp. YE78 Genome sequencing (DOE Joint Genome Institute) |
PRJNA311405 | SRA or Trace | Sarcina sp. dsm 11001 | Sarcina sp. dsm 11001 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185731 | Scaffolds | Segatella baroniae C21a | Prevotella bryantii C21a (DOE Joint Genome Institute) |
PRJNA303341 | SRA or Trace | Segatella bryantii | Prevotella bryantii FB3001 genome sequencing (DOE Joint Genome Institute) |
PRJNA322967 | SRA or Trace | Segatella bryantii | Prevotella bryantii KHPX14 genome sequencing (DOE Joint Genome Institute) |
PRJNA223439 | Scaffolds | Selenomonas bovis 8-14-1 | Selenomonas bovis 8-14-1 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303326 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminantium Z108 genome sequencing (DOE Joint Genome Institute) |
PRJNA323196 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminatium S137 genome sequencing (DOE Joint Genome Institute) |
PRJNA254882 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminantium strain:C3 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254916 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminantium strain:GACV-9 Genome sequencing (DOE Joint Genome Institute) |
PRJNA319690 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminantium L14 genome sequencing (DOE Joint Genome Institute) |
PRJNA319691 | SRA or Trace | Selenomonas ruminantium | Selenomonas sp. WCT3 genome sequencing (DOE Joint Genome Institute) |
PRJNA319689 | SRA or Trace | Selenomonas ruminantium | Selenomonas sp. KH1T6 genome sequencing (DOE Joint Genome Institute) |
PRJNA319688 | SRA or Trace | Selenomonas ruminantium | Selenomonas ruminantium HD4 genome sequencing (DOE Joint Genome Institute) |
PRJNA217195 | Contigs | Selenomonas ruminantium AC2024 | Selenomonas ruminantium AC2024 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254915 | SRA or Trace | Selenomonas ruminantium subsp. lactilytica | Selenomonas ruminantium subsp. lactilytica strain:DSM 2872 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185691 | Scaffolds | Selenomonas ruminantium subsp. ruminantium ATCC 12561 | Selenomonas ruminantium ATCC 12561 (DOE Joint Genome Institute) |
PRJNA217197 | Contigs | Selenomonas sp. AB3002 | Selenomonas sp. AB3002 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA243947 | Scaffolds | Selenomonas sp. AE3005 | Selenomonas sp. AE3005 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223010 | Scaffolds | Selenomonas sp. FC4001 | Selenomonas sp. FC4001 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223458 | Scaffolds | Selenomonas sp. ND2010 | Selenomonas sp. ND2010 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303262 | SRA or Trace | Sharpea azabuensis | Sharpea azabuensis DSM 20406 genome sequencing (DOE Joint Genome Institute) |
PRJNA303261 | SRA or Trace | Sharpea azabuensis | Sharpea azabuensis KH1P5 genome sequencing (DOE Joint Genome Institute) |
PRJNA303260 | SRA or Trace | Sharpea azabuensis | Sharpea azabuensis KH2P10 genome sequencing (DOE Joint Genome Institute) |
PRJNA223483 | Scaffolds | Sharpea azabuensis DSM 18934 | Sharpea azabuensis DSM 18934 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA323317 | SRA or Trace | Shigella sonnei | Shigella sonnei NLAE-zl-G496 genome sequencing (DOE Joint Genome Institute) |
PRJNA303357 | SRA or Trace | Staphylococcus epidermidis | Staphylococcus epidermidis NLAE-zl-G239 genome sequencing (DOE Joint Genome Institute) |
PRJNA237256 | Contigs | Staphylococcus epidermidis AG42 | Staphylococcus epidermidis AG42 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA239123 | Contigs | Streptococcus equinus | Streptococcus equinus strain:AG46 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254920 | SRA or Trace | Streptococcus equinus | Streptococcus equinus strain:GA-1 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303259 | SRA or Trace | Streptococcus equinus | Streptococcus equinus pGA-7 genome sequencing (DOE Joint Genome Institute) |
PRJNA303258 | SRA or Trace | Streptococcus equinus | Streptococcus equinus pR-5 genome sequencing (DOE Joint Genome Institute) |
PRJNA303552 | SRA or Trace | Streptococcus equinus | Streptococcus bovis ES1 genome sequencing (DOE Joint Genome Institute) |
PRJNA303553 | SRA or Trace | Streptococcus equinus | Streptococcus bovis C277 genome sequencing (DOE Joint Genome Institute) |
PRJNA322973 | SRA or Trace | Streptococcus equinus | Streptococcus equinus H24 genome sequencing (DOE Joint Genome Institute) |
PRJNA322974 | SRA or Trace | Streptococcus equinus | Streptococcus equinus MPR1 genome sequencing (DOE Joint Genome Institute) |
PRJNA322977 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb04 genome sequencing (DOE Joint Genome Institute) |
PRJNA322978 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb05 genome sequencing (DOE Joint Genome Institute) |
PRJNA322980 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb10 genome sequencing (DOE Joint Genome Institute) |
PRJNA322983 | SRA or Trace | Streptococcus equinus | Streptococcus ruminicola Sb18 genome sequencing (DOE Joint Genome Institute) |
PRJNA322984 | SRA or Trace | Streptococcus equinus | Streptococcus ruminicola Sb20 genome sequencing (DOE Joint Genome Institute) |
PRJNA322986 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Ye01 genome sequencing (DOE Joint Genome Institute) |
PRJNA322982 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb17 genome sequencing (DOE Joint Genome Institute) |
PRJNA322981 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb13 genome sequencing (DOE Joint Genome Institute) |
PRJNA322985 | SRA or Trace | Streptococcus equinus | Streptococcus equinus SI genome sequencing (DOE Joint Genome Institute) |
PRJNA322976 | SRA or Trace | Streptococcus equinus | Streptococcus equinus MPR4 genome sequencing (DOE Joint Genome Institute) |
PRJNA322979 | SRA or Trace | Streptococcus equinus | Streptococcus equinus Sb09 genome sequencing (DOE Joint Genome Institute) |
PRJNA322972 | SRA or Trace | Streptococcus equinus | Streptococcus equinus AR3 genome sequencing (DOE Joint Genome Institute) |
PRJNA322975 | SRA or Trace | Streptococcus equinus | Streptococcus equinus MPR2 genome sequencing (DOE Joint Genome Institute) |
PRJNA223471 | Scaffolds | Streptococcus equinus 2B | Streptococcus equinus 2B strain:2B Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA185690 | Scaffolds | Streptococcus equinus B315 | Streptococcus bovis B315 (DOE Joint Genome Institute) |
PRJNA254886 | SRA or Trace | Streptococcus equinus JB1 | Streptococcus equinus JB1 Genome sequencing (DOE Joint Genome Institute) |
PRJNA185730 | Contigs | Streptococcus equinus SN033 | Streptococcus bovis SN033 (DOE Joint Genome Institute) |
PRJNA254919 | SRA or Trace | Streptococcus gallolyticus | Streptococcus gallolyticus strain:VTM1R27 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303257 | SRA or Trace | Streptococcus gallolyticus | Streptococcus gallolyticus VTM1R29 genome sequencing (DOE Joint Genome Institute) |
PRJNA303254 | SRA or Trace | Streptococcus gallolyticus | Streptococcus gallolyticus VTM3R42 genome sequencing (DOE Joint Genome Institute) |
PRJNA303255 | SRA or Trace | Streptococcus gallolyticus | Streptococcus gallolyticus VTM3R24 genome sequencing (DOE Joint Genome Institute) |
PRJNA303256 | SRA or Trace | Streptococcus gallolyticus | Streptococcus gallolyticus VTM2R47 genome sequencing (DOE Joint Genome Institute) |
PRJNA280233 | SRA or Trace | Streptococcus gordonii | Streptococcus gordonii strain:LMG 15572 Genome sequencing (DOE Joint Genome Institute) |
PRJNA254923 | SRA or Trace | Streptococcus henryi | Streptococcus henryi strain:A-4 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323318 | SRA or Trace | Streptococcus sp. 45 | Streptococcus sp. 45 strain:45 Genome sequencing (DOE Joint Genome Institute) |
PRJNA323319 | SRA or Trace | Streptococcus sp. NLAE-zl-C503 | Streptococcus sp. NLAE-zl-C503 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303355 | SRA or Trace | Succiniclasticum ruminis | Succiniclasticum ruminis DSM11005 genome sequencing (DOE Joint Genome Institute) |
PRJNA323061 | SRA or Trace | Succiniclasticum ruminis DSM 9236 | Succiniclasticum ruminis DSM 9236 genome sequencing (DOE Joint Genome Institute) |
PRJNA303363 | SRA or Trace | Succinivibrio dextrinosolvens | Succinivibrio dextrinosolvens 22B genome sequencing (DOE Joint Genome Institute) |
PRJNA254922 | SRA or Trace | Succinivibrio dextrinosolvens | Succinivibrio dextrinosolvens strain:ACV-10 Genome sequencing (DOE Joint Genome Institute) |
PRJNA223462 | Scaffolds | Succinivibrio dextrinosolvens H5 | Succinivibrio dextrinosolvens H5 strain:H5 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA254914 | SRA or Trace | Terrisporobacter glycolicus | Terrisporobacter glycolicus strain:KPPR-9 Genome sequencing (DOE Joint Genome Institute) |
PRJNA303253 | SRA or Trace | Treponema bryantii | Treponema bryantii XBD1002 genome sequencing (DOE Joint Genome Institute) |
PRJNA303371 | SRA or Trace | Treponema bryantii | Treponema bryantii B25 genome sequencing (DOE Joint Genome Institute) |
PRJNA185719 | Contigs | Treponema bryantii NK4A124 | Treponema bryantii NK4A124 (DOE Joint Genome Institute) |
PRJNA223484 | Scaffolds | Treponema sp. C6A8 | Treponema sp. C6A8 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223450 | Scaffolds | Xylanibacter brevis P6B11 | Xylanibacter brevis P6B11 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303555 | SRA or Trace | Xylanibacter ruminicola | Prevotella ruminicola BPI-162 genome sequencing (DOE Joint Genome Institute) |
PRJNA303554 | SRA or Trace | Xylanibacter ruminicola | Prevotella ruminicola BPI-34 genome sequencing (DOE Joint Genome Institute) |
PRJNA322968 | SRA or Trace | Xylanibacter ruminicola | Prevotella ruminicola AR32 genome sequencing (DOE Joint Genome Institute) |
PRJNA322970 | SRA or Trace | Xylanibacter ruminicola | Prevotella ruminicola KHT3 genome sequencing (DOE Joint Genome Institute) |
PRJNA322969 | SRA or Trace | Xylanibacter ruminicola | Prevotella ruminicola D31d genome sequencing (DOE Joint Genome Institute) |
PRJNA223454 | Contigs | Xylanibacter ruminicola Ga6B6 | Xylanibacter ruminicola Ga6B6 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA223500 | Contigs | [Clostridium] aerotolerans DSM 5434 | [Clostridium] aerotolerans DSM 5434 Genome sequencing and assembly (DOE Joint Genome Institute) |
PRJNA303219 | SRA or Trace | [Clostridium] aminophilum | Clostridium aminophilum KH1P1 genome sequencing (DOE Joint Genome Institute) |
PRJNA254907 | SRA or Trace | [Clostridium] aminophilum | [Clostridium] aminophilum strain:F Genome sequencing (DOE Joint Genome Institute) |
PRJNA185707 | Scaffolds | [Clostridium] clostridioforme AGR2157 | Clostridium clostridioforme AGR2157 (DOE Joint Genome Institute) |
PRJNA303297 | Scaffolds | [Clostridium] innocuum | Clostridium innocuum NLAE-zl-G197 genome sequencing (DOE Joint Genome Institute) |
PRJNA323324 | SRA or Trace | [Clostridium] innocuum | Clostridium innocuum NLAE-zl-C381 genome sequencing (DOE Joint Genome Institute) |
PRJNA303218 | SRA or Trace | [Clostridium] polysaccharolyticum DSM 1801 | Clostridium polysaccharolyticum DSM 1801 genome sequencing (DOE Joint Genome Institute) |
PRJNA223050 | Scaffolds | [Eubacterium] cellulosolvens LD2006 | [Eubacterium] cellulosolvens LD2006 Genome sequencing and assembly (DOE Joint Genome Institute) |