Bacteria (ID 474823) - BioProject

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Accession: PRJNA474823 ID: 474823

Bacteria

Lactic acid bacteria of Slovakian bryndza cheese.

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This project is a component of the The Lactobacillus genus, a use case for Bactopia.

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216 additional projects are components of the The Lactobacillus genus, a use case for Bactopia..

Twenty one representative strains of lactic acid bacteria isolated from bryndza cheese were selected and submitted for comparative genomics. More...

Accession	PRJNA474823
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 30-Jul-2018 Faculty of Natural Sciences of the Comenius University in Bratislava
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2423
WGS master	21
SRA Experiments	21
Protein Sequences	51448
Other datasets
BioSample	21
Assembly	21

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

3
18
21

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003346255.1	QMJQ00000000	SAMN09398949	KMB_617	Enterococcus faecium
GCA_003346195.1	QMJX00000000	SAMN09398956	KMB_624	Enterococcus faecium
GCA_003346015.1	QMJW00000000	SAMN09398955	KMB_623	Lacticaseibacillus paracasei
GCA_003346025.1	QMJV00000000	SAMN09398954	KMB_622	Lacticaseibacillus paracasei
GCA_003346265.1	QMJP00000000	SAMN09398948	KMB_616	Lacticaseibacillus paracasei
GCA_003367655.1	QMJF00000000	SAMN09398938	KMB_598	Lacticaseibacillus paracasei subsp. paracasei
GCA_003346405.1	QMJG00000000	SAMN09398939	KMB_599	Lactiplantibacillus paraplantarum
GCA_003346235.1	QMJS00000000	SAMN09398951	KMB_619	Lactiplantibacillus plantarum
GCA_003346075.1	QMJU00000000	SAMN09398953	KMB_621	Lactiplantibacillus plantarum
GCA_003346105.1	QMJN00000000	SAMN09398946	KMB_614	Lactiplantibacillus plantarum
GCA_003346085.1	QMJR00000000	SAMN09398950	KMB_618	Lactiplantibacillus plantarum
GCA_003346175.1	QMJE00000000	SAMN09398937	KMB_597	Lactiplantibacillus plantarum
GCA_003346395.1	QMJD00000000	SAMN09398936	KMB_596	Lactococcus cremoris
GCA_003346345.1	QMJK00000000	SAMN09398943	KMB_611	Leuconostoc mesenteroides subsp. mesenteroides
GCA_003346165.1	QMJH00000000	SAMN09398940	KMB_608	Leuconostoc mesenteroides subsp. mesenteroides
GCA_003346155.1	QMJI00000000	SAMN09398941	KMB_609	Leuconostoc mesenteroides subsp. mesenteroides
GCA_003346375.1	QMJJ00000000	SAMN09398942	KMB_610	Leuconostoc pseudomesenteroides
GCA_003346245.1	QMJT00000000	SAMN09398952	KMB_620	Levilactobacillus brevis
GCA_003346095.1	QMJO00000000	SAMN09398947	KMB_615	Levilactobacillus brevis
GCA_003346325.1	QMJL00000000	SAMN09398944	KMB_612	Limosilactobacillus fermentum
GCA_003346315.1	QMJM00000000	SAMN09398945	KMB_613	Limosilactobacillus fermentum

SRA Data Details

Parameter	Value
Data volume, Gbases	25
Data volume, Mbytes	12142

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Bacteria

Lactic acid bacteria of Slovakian bryndza cheese.

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