Phoca vitulina isolate:PV1807 (ID 494181) - BioProject

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Accession: PRJNA494181 ID: 494181

Phoca vitulina isolate:PV1807 (harbor seal)

Harbor seal (Phoca vitulina) genome sequencing and assembly

See Genome Information for Phoca vitulina

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This project is a component of the CanSeq150 Project: Genome Data and Assemblies

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3 additional projects are related by organism.

47 additional projects are components of the CanSeq150 Project: Genome Data and Assemblies.

Genomic sequencing and assembly of the Harbor seal (Phoca vitulina). This project is part of the Canseq150 program provided by CGEN - Canada's Genomics Enterprise and its partners.

Accession	PRJNA494181
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Phoca vitulina[Taxonomy ID: 9720] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phoca; Phoca vitulina
Publications	Nilsson MA et al., "Radiation of extant marsupials after the K/T boundary: evidence from complete mitochondrial genomes.", J Mol Evol, 2003;57 Suppl 1:S3-12 Arnason U et al., "The complete mitochondrial DNA sequence of the harbor seal, Phoca vitulina.", J Mol Evol, 1992 Jun;34(6):493-505
Submission	Registration date: 11-Feb-2019 Canada's Genome Enterprise (CGEN) - BC Cancer - BC Cancer Genome Sciences Centre
Relevance	Environmental
Locus Tag Prefix	D7043

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	767
WGS master	1
SRA Experiments	1
Publications
PubMed	2
Other datasets
BioSample	1
Assembly	1

Genome assemblies, organelles and plasmids:

Assembly GCA_004348235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	RXNX00000000

SRA Data Details

Parameter	Value
Data volume, Gbases	119
Data volume, Mbytes	54830

Related RefSeq Project

PRJNA605348 : Phoca vitulina isolate:PV1807 RefSeq Genome sequencing and assembly

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LinkOut to external resources

GOLD: Gp0441419 [Genomes On Line Database]
GOLD: Gp0441419
Genomes On Line Database

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Phoca vitulina isolate:PV1807
Phoca vitulina isolate:PV1807
Harbor seal (Phoca vitulina) genome sequencing and assembly

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Homo sapiens zinc finger and BTB domain containing 32, mRNA (cDNA clone MGC:21109 IMAGE:4419776), complete cds
gi|34189713|gb|BC017700.2|

Nucleotide
RecName: Full=Serine/threonine-protein phosphatase 2B catalytic subunit beta iso...
RecName: Full=Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform; AltName: Full=CAM-PRP catalytic subunit; AltName: Full=Calmodulin-dependent calcineurin A subunit beta isoform; Short=CNA beta
gi|55584163|sp|P48453.2|PP2BB_MOUSE

Protein
Mouse prolactin receptor mRNA, complete cds
Mouse prolactin receptor mRNA, complete cds
gi|293769|gb|L14811.1|MUSPROLACR

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