ID 510145 - BioProject

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Accession: PRJNA510145 ID: 510145

Strigops habroptila (kakapo) genome assembly, bStrHab1

See Genome Information for Strigops habroptila

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This project is a component of the Vertebrate Genomes Project

This project is a component of the B10K Reference Genome Project

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530 additional projects are components of the Vertebrate Genomes Project.

50 additional projects are components of the B10K Reference Genome Project.

Strigops habroptilus (Kakapo) Genome sequencing and assembly. Released from embargo April 29, 2021 in Rhie et al Nature. 2021 7856:737-746 and Dussex et al Cell Genomics 2021 https://doi.org/10.1016/j.xgen.2021.100002

Accession	PRJNA510145
Type	Umbrella project
Organism	Strigops habroptila[Taxonomy ID: 2489341] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops; Strigops habroptila
Grants	"Promotion and science development" (Grant ID 1, Pacific BioSciences) "Molecular mechanisms of vocal learning" (Grant ID 1, Howard Hughes Medical Institute) "Promotion and science development" (Grant ID 1, Bionano Genomics)
Submission	Registration date: 14-Dec-2018 Vertebrate Genomes Project - G10K - Vertebrate Genomes Lab - Bionano Genomics - Pacific BioSciences
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	49899
WGS master	2
Transcript	49757
SRA Experiments	123
Protein Sequences	43613
Publications
PubMed	3
PMC	3
Other datasets
BioSample	1
Assembly	2

SRA Data Details

Parameter	Value
Data volume, Gbases	308
Data volume, Tbytes	0.10

This project encompasses the following 4 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Chromosomes
Scaffolds
SRA or Trace
Total

2
1
1
4

BioProject accession	Assembly level	Name	Title
PRJNA489135	Chromosomes	Strigops habroptila	Strigops habroptila (Kakapo) Genome sequencing and assembly, primary haplotype, v1 (Vertebrate Genomes Project)
PRJNA489134	Scaffolds	Strigops habroptila	Strigops habroptila (Kakapo) genome sequencing and assembly, alternate haplotype, v1 (Vertebrate Genomes Project)
PRJNA558775	Chromosomes	Strigops habroptila	Strigops habroptila isolate:Jane RefSeq Genome sequencing and assembly (NCBI)
PRJNA1005977	SRA or Trace	Strigops habroptila (Kakapo), bStrHab1, sequence data.	Strigops habroptila (Kakapo), bStrHab1, sequence data. (G10K)

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Strigops habroptila (kakapo) genome assembly, bStrHab1

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