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Accession: PRJNA523022 ID: 523022

freshwater metagenome

Lake Tanganyika Metagenome-Assembled Genomes Metagenome

Metagenome assembled genomes obtained from Lake Tanganyika
AccessionPRJNA523022
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismfreshwater metagenome[Taxonomy ID: 449393]
unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
Publications
  • Published online: Tran P et al., "Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika", The ISME Journal, 2021;
SubmissionRegistration date: 11-Feb-2021
University of Wisconsin - Madison
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)523
Other datasets
BioSample803
Assembly523
Assembly details:
Assembly levelNumber of Assemblies
523
523
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_016871375.1ContigVFYY00000000SAMN10966228
K_Offshore_120m_m2_006
GCA_016871275.1ContigVFZG00000000SAMN10966236
M_DeepCast_65m_m2_224
GCA_016871255.1ContigVFZH00000000SAMN10966237
K_Offshore_80m_m2_020
GCA_016871235.1ContigVFZI00000000SAMN10966238
K_Offshore_80m_m2_035
GCA_016871215.1ContigVFZK00000000SAMN10966240
K_Offshore_80m_m2_092
GCA_016871175.1ContigVFZL00000000SAMN10966241
K_Offshore_80m_m2_117
GCA_016871335.1ContigVFZF00000000SAMN10966235
K_DeepCast_65m_m1_223
GCA_016871315.1ContigVFZE00000000SAMN10966234
K_DeepCast_65m_m1_022
GCA_016871155.1ContigVFZO00000000SAMN10966244
M_DeepCast_100m_m2_066
GCA_016871135.1ContigVFZQ00000000SAMN10966246
M_DeepCast_100m_mx_118
GCA_016871115.1ContigVFZP00000000SAMN10966245
M_DeepCast_100m_m2_149
GCA_016871095.1ContigVFZS00000000SAMN10966248
K_DeepCast_250m_m1_110
GCA_016871075.1ContigVFZT00000000SAMN10966249
K_DeepCast_250m_m2_119
GCA_016871055.1ContigVFZW00000000SAMN10966252
K_DeepCast_65m_m2_251
GCA_016871025.1ContigVFZV00000000SAMN10966251
M_DeepCast_50m_m2_162
GCA_016871015.1ContigVFZX00000000SAMN10966253
K_Offshore_80m_m2_003
GCA_016870995.1ContigVFZU00000000SAMN10966250
K_Offshore_40m_m2_176
GCA_016871195.1ContigVFZN00000000SAMN10966243
M_surface_10_m1_251
GCA_016870915.1ContigVFZY00000000SAMN10966254
K_Offshore_80m_m2_102
GCA_016866025.1ContigVGNS00000000SAMN10966614
K_DeepCast_150m_m2_272
GCA_016870895.1ContigVGAA00000000SAMN10966256
M_surface_7_m2_032
GCA_016870865.1ContigVGAC00000000SAMN10966258
M_surface_8_m2_026
GCA_016870855.1ContigVGAF00000000SAMN10966261
M_surface_9_m1_017
GCA_016870835.1ContigVGAG00000000SAMN10966263
M_surface_9_m2_080
GCA_016870815.1ContigVGAI00000000SAMN10966265
M_surface_10_m2_076
GCA_016870795.1ContigVGAJ00000000SAMN10966266
M_surface_10_m2_136
GCA_016870775.1ContigVGAK00000000SAMN10966267
M_surface_10_m2_188
GCA_016870725.1ContigVGAN00000000SAMN10966270
K_DeepCast_100m_m1_278
GCA_016870735.1ContigVGAS00000000SAMN10966275
K_DeepCast_1200m_m2_005
GCA_016870715.1ContigVGAL00000000SAMN10966268
K_Offshore_0m_m1_007
GCA_016870695.1ContigVGAV00000000SAMN10966278
K_DeepCast_1200m_m2_272
GCA_016870675.1ContigVGAU00000000SAMN10966277
K_DeepCast_1200m_m2_204
GCA_016870655.1ContigVGBA00000000SAMN10966283
K_DeepCast_150m_m2_294
GCA_016870635.1ContigVGAX00000000SAMN10966280
K_DeepCast_150m_m1_051
GCA_016870615.1ContigVGAZ00000000SAMN10966282
K_DeepCast_150m_m2_097
GCA_016870595.1ContigVGBI00000000SAMN10966291
K_DeepCast_35m_m1_297
GCA_016870575.1ContigVGBH00000000SAMN10966290
K_DeepCast_35m_m1_047
GCA_016870535.1ContigVGBK00000000SAMN10966293
M_DeepCast_400m_m2_130
GCA_016870525.1ContigVGBJ00000000SAMN10966292
M_DeepCast_400m_m1_127
GCA_016870515.1ContigVGBL00000000SAMN10966294
K_Offshore_40m_m1_268
GCA_016870485.1ContigVGBM00000000SAMN10966295
K_Offshore_40m_m2_012
GCA_016870475.1ContigVGBO00000000SAMN10966297
K_Offshore_40m_m2_105
GCA_016870455.1ContigVGBN00000000SAMN10966296
K_Offshore_40m_m2_034
GCA_016870415.1ContigVGBP00000000SAMN10966298
K_Offshore_40m_m2_139
GCA_016870425.1ContigVGBQ00000000SAMN10966299
K_Offshore_40m_m2_150
GCA_016870395.1ContigVGBT00000000SAMN10966302
K_DeepCast_65m_m2_097
GCA_016870355.1ContigVGBR00000000SAMN10966300
M_DeepCast_50m_m2_189
GCA_016870365.1ContigVGBW00000000SAMN10966305
K_DeepCast_65m_m2_221
GCA_016870325.1ContigVGBV00000000SAMN10966304
K_DeepCast_65m_m2_213
GCA_016870315.1ContigVGBX00000000SAMN10966306
M_DeepCast_65m_m2_256
GCA_016870295.1ContigVGBY00000000SAMN10966307
K_Offshore_80m_m1_031
GCA_016870275.1ContigVGBZ00000000SAMN10966308
K_Offshore_80m_m1_195
GCA_016870245.1ContigVGCA00000000SAMN10966309
K_Offshore_80m_m2_056
GCA_016870235.1ContigVGCB00000000SAMN10966310
K_Offshore_80m_m2_094
GCA_016870215.1ContigVGCD00000000SAMN10966312
K_Offshore_surface_m2_010
GCA_016870195.1ContigVGCC00000000SAMN10966311
K_Offshore_80m_m2_226
GCA_016871435.1ContigVFYX00000000SAMN10966227
K_Offshore_120m_m1_195
GCA_016871355.1ContigVFZC00000000SAMN10966232
K_Offshore_40m_m2_124
GCA_016871395.1ContigVFYV00000000SAMN10966225
K_DeepCast_0m_m1_227
GCA_016870975.1ContigVGAE00000000SAMN10966260
M_surface_9_m1_009
GCA_016870945.1ContigVGAH00000000SAMN10966264
M_surface_9_m2_101
GCA_016870935.1ContigVGAB00000000SAMN10966257
M_surface_7_m2_239
GCA_016870155.1ContigVGCE00000000SAMN10966313
K_Offshore_surface_m2_014
GCA_016871295.1ContigVFZD00000000SAMN10966233
M_DeepCast_50m_m2_117
GCA_016875775.1ContigVGOV00000000SAMN10966643
K_DeepCast_65m_m2_193
GCA_016870135.1ContigVGCF00000000SAMN10966314
M_surface_7_m2_013
GCA_016870115.1ContigVGCH00000000SAMN10966316
M_surface_9_m2_109
GCA_016870095.1ContigVGCI00000000SAMN10966317
M_surface_10_m2_100
GCA_016870055.1ContigVGCQ00000000SAMN10966325
K_Offshore_120m_m2_043
GCA_016870045.1ContigVGCL00000000SAMN10966320
K_DeepCast_100m_mx_141
GCA_016870035.1ContigVGCJ00000000SAMN10966318
M_surface_10_m2_180
GCA_016870015.1ContigVGCV00000000SAMN10966330
K_DeepCast_250m_m2_101
GCA_016869995.1ContigVGCU00000000SAMN10966329
M_DeepCast_200m_mx_060
GCA_016869975.1ContigVGCZ00000000SAMN10966334
K_DeepCast_35m_m2_067
GCA_016869955.1ContigVGCY00000000SAMN10966333
K_DeepCast_35m_m1_317
GCA_016869935.1ContigVGCX00000000SAMN10966332
K_DeepCast_35m_m1_027
GCA_016869895.1ContigVGDC00000000SAMN10966337
M_DeepCast_400m_m1_040
GCA_016869915.1ContigVGDA00000000SAMN10966335
K_DeepCast_35m_m2_271
GCA_016869875.1ContigVGDE00000000SAMN10966339
M_DeepCast_400m_m1_328
GCA_016869845.1ContigVGDB00000000SAMN10966336
K_DeepCast_35m_m2_327
GCA_016869835.1ContigVGDH00000000SAMN10966342
K_Offshore_40m_m1_238
GCA_016869815.1ContigVGDI00000000SAMN10966343
K_Offshore_40m_m1_243
GCA_016869765.1ContigVGES00000000SAMN10966379
K_Offshore_80m_m2_186
GCA_016869775.1ContigVGDJ00000000SAMN10966344
K_Offshore_40m_m2_131
GCA_016869745.1ContigVGDK00000000SAMN10966345
K_Offshore_40m_m2_283
GCA_016869735.1ContigVGDL00000000SAMN10966346
K_Offshore_40m_mx_105
GCA_016869715.1ContigVGDM00000000SAMN10966347
K_Offshore_40m_mx_120
GCA_016869695.1ContigVGDN00000000SAMN10966348
M_DeepCast_50m_m1_063
GCA_016869675.1ContigVGDP00000000SAMN10966350
M_DeepCast_50m_m2_221
GCA_016869635.1ContigVGDQ00000000SAMN10966351
K_DeepCast_65m_m1_262
GCA_016869645.1ContigVGDO00000000SAMN10966349
M_DeepCast_50m_m2_111
GCA_016869615.1ContigVGDS00000000SAMN10966353
M_DeepCast_65m_m1_019
GCA_016869595.1ContigVGDT00000000SAMN10966354
M_DeepCast_65m_m1_022
GCA_016869575.1ContigVGDV00000000SAMN10966356
M_DeepCast_65m_m1_275
GCA_016869555.1ContigVGDY00000000SAMN10966359
M_DeepCast_65m_m2_041
GCA_016869535.1ContigVGDX00000000SAMN10966358
M_DeepCast_65m_m2_016
GCA_016869515.1ContigVGDZ00000000SAMN10966360
M_DeepCast_65m_m2_129
GCA_016869495.1ContigVGEA00000000SAMN10966361
M_DeepCast_65m_m2_243
GCA_016869475.1ContigVGEE00000000SAMN10966365
K_Offshore_80m_m1_220
GCA_016869455.1ContigVGEF00000000SAMN10966366
K_Offshore_80m_m2_048
GCA_016869435.1ContigVGEB00000000SAMN10966362
M_DeepCast_65m_mx_036
GCA_016869415.1ContigVGEI00000000SAMN10966369
K_Offshore_80m_m2_053
GCA_016869395.1ContigVGEG00000000SAMN10966367
K_Offshore_80m_m2_049
GCA_016869375.1ContigVGEH00000000SAMN10966368
K_Offshore_80m_m2_051
GCA_016869355.1ContigVGEK00000000SAMN10966371
K_Offshore_80m_m2_081
GCA_016869335.1ContigVGEJ00000000SAMN10966370
K_Offshore_80m_m2_061
GCA_016869315.1ContigVGEM00000000SAMN10966373
K_Offshore_80m_m2_101
GCA_016869285.1ContigVGEN00000000SAMN10966374
K_Offshore_80m_m2_107
GCA_016869275.1ContigVGEO00000000SAMN10966375
K_Offshore_80m_m2_115
GCA_016869255.1ContigVGEQ00000000SAMN10966377
K_Offshore_80m_m2_146
GCA_016869235.1ContigVGER00000000SAMN10966378
K_Offshore_80m_m2_162
GCA_016869215.1ContigVGEP00000000SAMN10966376
K_Offshore_80m_m2_123
GCA_016869195.1ContigVGET00000000SAMN10966380
K_Offshore_80m_m2_187
GCA_016869175.1ContigVGEV00000000SAMN10966382
K_Offshore_80m_m2_228
GCA_016869145.1ContigVGEU00000000SAMN10966381
K_Offshore_80m_m2_191
GCA_016869135.1ContigVGEW00000000SAMN10966383
K_Offshore_surface_m1_194
GCA_016869095.1ContigVGEX00000000SAMN10966384
K_Offshore_surface_m2_020
GCA_016869075.1ContigVGEY00000000SAMN10966385
K_Offshore_surface_mx_080
GCA_016870175.1ContigVGCG00000000SAMN10966315
M_surface_8_m2_185
GCA_016869045.1ContigVGFC00000000SAMN10966389
K_DeepCast_250m_m2_231
GCA_016869025.1ContigVGFA00000000SAMN10966387
K_DeepCast_1200m_m2_191
GCA_016869015.1ContigVGFB00000000SAMN10966388
K_DeepCast_150m_m2_147
GCA_016868995.1ContigVGFE00000000SAMN10966391
M_DeepCast_50m_m2_207
GCA_016868975.1ContigVGFD00000000SAMN10966390
M_DeepCast_50m_m2_086
GCA_016868955.1ContigVGFF00000000SAMN10966392
K_Offshore_80m_m1_225
GCA_016869115.1ContigVGEZ00000000SAMN10966386
K_DeepCast_100m_m2_289
GCA_016874655.1ContigVGTO00000000SAMN10966766
K_DeepCast_150m_m2_056
GCA_016872075.1ContigVHBF00000000SAMN10966966
M_surface_6_m1_040
GCA_016866415.1ContigVGML00000000SAMN10966581
M_surface_9_m2_064
GCA_016866375.1ContigVGMK00000000SAMN10966580
M_surface_9_m2_059
GCA_016866385.1ContigVGMU00000000SAMN10966590
K_Offshore_40m_m1_251
GCA_016866355.1ContigVGMN00000000SAMN10966583
K_DeepCast_0m_m2_222
GCA_016866335.1ContigVGMT00000000SAMN10966589
K_DeepCast_35m_m2_130
GCA_016866255.1ContigVGMY00000000SAMN10966594
K_Offshore_surface_m2_005
GCA_016866235.1ContigVGMW00000000SAMN10966592
K_Offshore_40m_m2_287
GCA_016868915.1ContigVGFL00000000SAMN10966398
M_surface_7_m2_242
GCA_016868905.1ContigVGFH00000000SAMN10966394
M_surface_6_mx_051
GCA_016868895.1ContigVGFK00000000SAMN10966397
M_surface_7_m2_191
GCA_016868875.1ContigVGFN00000000SAMN10966400
M_surface_8_m2_110
GCA_016868855.1ContigVGFP00000000SAMN10966402
M_surface_9_m1_013
GCA_016868835.1ContigVGFR00000000SAMN10966404
M_surface_9_m1_277
GCA_016868815.1ContigVGFQ00000000SAMN10966403
M_surface_9_m1_241
GCA_016868785.1ContigVGFS00000000SAMN10966405
M_surface_9_m1_279
GCA_016868775.1ContigVGFT00000000SAMN10966406
M_surface_9_m1_282
GCA_016868755.1ContigVGFU00000000SAMN10966407
M_surface_9_m2_088
GCA_016868735.1ContigVGFV00000000SAMN10966408
M_surface_9_mx_130
GCA_016868715.1ContigVGFW00000000SAMN10966409
M_surface_9_mx_152
GCA_016868695.1ContigVGGA00000000SAMN10966413
K_DeepCast_0m_m2_115
GCA_016868645.1ContigVGFY00000000SAMN10966411
M_surface_10_m2_196
GCA_016868635.1ContigVGGI00000000SAMN10966421
K_DeepCast_100m_m2_162
GCA_016868615.1ContigVGGH00000000SAMN10966420
K_DeepCast_100m_m2_150
GCA_016868585.1ContigVGGR00000000SAMN10966430
M_DeepCast_50m_m1_018
GCA_016868575.1ContigVGGL00000000SAMN10966424
K_DeepCast_150m_m2_049
GCA_016868535.1ContigVGGQ00000000SAMN10966429
K_DeepCast_35m_m2_065
GCA_016868525.1ContigVGGS00000000SAMN10966431
M_DeepCast_50m_m1_274
GCA_016868515.1ContigVGGM00000000SAMN10966425
K_DeepCast_150m_m2_259
GCA_016868485.1ContigVGGT00000000SAMN10966432
M_DeepCast_50m_m1_285
GCA_016868475.1ContigVGGU00000000SAMN10966433
M_DeepCast_65m_mx_068
GCA_016868455.1ContigVGGV00000000SAMN10966434
K_Offshore_80m_m1_206
GCA_016868395.1ContigVGGW00000000SAMN10966435
K_Offshore_surface_m2_247
GCA_016868375.1ContigVGHA00000000SAMN10966439
M_surface_7_m1_304
GCA_016868355.1ContigVGHB00000000SAMN10966440
M_surface_9_m1_249
GCA_016868315.1ContigVGHE00000000SAMN10966443
M_surface_10_m2_064
GCA_016868305.1ContigVGHK00000000SAMN10966449
M_DeepCast_100m_m2_214
GCA_016868295.1ContigVGHJ00000000SAMN10966448
M_DeepCast_100m_m1_373
GCA_016868275.1ContigVGHL00000000SAMN10966450
K_Offshore_120m_m1_203
GCA_016868255.1ContigVGHN00000000SAMN10966452
K_DeepCast_35m_m1_018
GCA_016868225.1ContigVGHP00000000SAMN10966454
K_DeepCast_35m_m2_259
GCA_016868205.1ContigVGHR00000000SAMN10966456
K_Offshore_40m_m1_237
GCA_016868195.1ContigVGHQ00000000SAMN10966455
K_Offshore_40m_m1_049
GCA_016868175.1ContigVGHO00000000SAMN10966453
K_DeepCast_35m_m1_286
GCA_016868155.1ContigVGHS00000000SAMN10966457
K_Offshore_40m_m1_259
GCA_016868135.1ContigVGHT00000000SAMN10966458
K_Offshore_40m_m1_292
GCA_016868095.1ContigVGHV00000000SAMN10966460
K_Offshore_40m_m2_080
GCA_016868105.1ContigVGIA00000000SAMN10966465
K_DeepCast_65m_m2_129
GCA_016868075.1ContigVGHW00000000SAMN10966461
K_Offshore_40m_m2_212
GCA_016868055.1ContigVGHX00000000SAMN10966462
K_Offshore_40m_mx_035
GCA_016868035.1ContigVGID00000000SAMN10966468
K_Offshore_80m_m1_178
GCA_016868015.1ContigVGIF00000000SAMN10966470
K_Offshore_80m_m2_113
GCA_016867965.1ContigVGIH00000000SAMN10966472
K_Offshore_surface_m1_010
GCA_016867975.1ContigVGIC00000000SAMN10966467
M_DeepCast_65m_m2_126
GCA_016867955.1ContigVGIE00000000SAMN10966469
K_Offshore_80m_m2_043
GCA_016867925.1ContigVGIJ00000000SAMN10966474
K_Offshore_surface_m1_273
GCA_016868425.1ContigVGHD00000000SAMN10966442
M_surface_10_m1_315
GCA_016868415.1ContigVGHM00000000SAMN10966451
K_Offshore_120m_m2_141
GCA_016867875.1ContigVGIL00000000SAMN10966476
K_Offshore_surface_m2_092
GCA_016873935.1ContigVGVT00000000SAMN10966823
K_DeepCast_150m_m1_387
GCA_016873905.1ContigVGVU00000000SAMN10966824
K_DeepCast_150m_m2_250
GCA_016867865.1ContigVGIP00000000SAMN10966480
M_DeepCast_400m_m2_340
GCA_016867855.1ContigVGIO00000000SAMN10966479
K_DeepCast_250m_m2_227
GCA_016867835.1ContigVGIQ00000000SAMN10966481
M_DeepCast_65m_m1_265
GCA_016867675.1ContigVGIZ00000000SAMN10966490
K_DeepCast_250m_m1_172
GCA_016867655.1ContigVGJA00000000SAMN10966491
M_DeepCast_200m_m2_220
GCA_016867635.1ContigVGJC00000000SAMN10966493
K_DeepCast_150m_m1_388
GCA_016867615.1ContigVGJG00000000SAMN10966497
M_DeepCast_400m_m2_293
GCA_016867585.1ContigVGJF00000000SAMN10966496
M_DeepCast_400m_m2_244
GCA_016867575.1ContigVGJD00000000SAMN10966494
K_DeepCast_250m_m1_044
GCA_016867535.1ContigVGJE00000000SAMN10966495
M_DeepCast_400m_m2_133
GCA_016867505.1ContigVGJH00000000SAMN10966498
K_DeepCast_250m_m2_015
GCA_016875605.1ContigVGPH00000000SAMN10966655
K_DeepCast_150m_m2_105
GCA_016875595.1ContigVGPI00000000SAMN10966656
K_DeepCast_250m_m1_043
GCA_016875575.1ContigVGPK00000000SAMN10966658
M_DeepCast_400m_m2_266
GCA_016871905.1ContigVHBR00000000SAMN10966978
K_Offshore_120m_m2_035
GCA_016871865.1ContigVHBS00000000SAMN10966979
K_DeepCast_35m_m1_037
GCA_016871815.1ContigVHBT00000000SAMN10966980
K_Offshore_40m_m1_063
GCA_016867455.1ContigVGJJ00000000SAMN10966500
M_DeepCast_50m_m2_156
GCA_016867725.1ContigVGIX00000000SAMN10966488
M_DeepCast_400m_m1_028
GCA_016867715.1ContigVGIW00000000SAMN10966487
K_DeepCast_150m_m1_344
GCA_016867695.1ContigVGIY00000000SAMN10966489
M_DeepCast_400m_m2_100
GCA_016867495.1ContigVGJL00000000SAMN10966502
K_DeepCast_250m_m1_333
GCA_016867475.1ContigVGJN00000000SAMN10966504
K_DeepCast_250m_m1_078
GCA_016873955.1ContigVGVS00000000SAMN10966822
M_DeepCast_400m_m2_153
GCA_016867395.1ContigVGJS00000000SAMN10966509
K_DeepCast_65m_m1_133
GCA_016867415.1ContigVGJO00000000SAMN10966505
K_Offshore_120m_m1_041
GCA_016867435.1ContigVGJP00000000SAMN10966506
M_DeepCast_65m_m2_204
GCA_016867375.1ContigVGJQ00000000SAMN10966507
M_DeepCast_65m_m1_095
GCA_016867345.1ContigVGJR00000000SAMN10966508
M_DeepCast_65m_mx_099
GCA_016867315.1ContigVGJV00000000SAMN10966512
M_DeepCast_50m_m2_187
GCA_016882195.1ContigVGLU00000000SAMN10966563
M_DeepCast_400m_m2_128
GCA_016867255.1ContigVGKB00000000SAMN10966518
K_DeepCast_150m_m2_305
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K_DeepCast_150m_m2_307

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