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Accession: PRJDB8148 ID: 531109

Enterobacteriaceae

Whole genome sequencing of colistin-resistant Enterobacteriaceae isolated in Japan

Multidrug-resistant (MDR) Gram-negative bacteria (GNB), including Enterobacteriaceae, are a serious threat to public health due to limited management of severe infections and high mortality. More...
AccessionPRJDB8148
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEnterobacteriaceae[Taxonomy ID: 543]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
SubmissionRegistration date: 16-May-2019
National Institute of Infectious Diseases
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)40813
WGS master86
Genomic DNA1
Other datasets
BioSample87
Assembly86
Assembly details:
Assembly levelNumber of Assemblies
86
86
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_006535915.1ContigBJKC00000000SAMD00166928
SMEc189
GCA_008326485.1ContigBKCC00000000
SAMD00166933
PWD451
GCA_008326465.1ContigBKCB00000000
SAMD00166932
PWD441
GCA_008326445.1ContigBKCA00000000
SAMD00166931
PWD291
GCA_008326405.1ContigBKBZ00000000
SAMD00166930
PWD181
GCA_008326365.1ContigBKBY00000000
SAMD00166929
PWD092
GCA_007992935.1ContigBKBF00000000
SAMD00179929
OIPHB_1
GCA_007992915.1ContigBKBE00000000
SAMD00179928
OIPH6_65
GCA_036247145.1ContigBLDI00000000
SAMD00168489
PWD281
GCA_036247115.1ContigBLDH00000000
SAMD00168488
PWD276
GCA_036247945.1ContigBLBT00000000
SAMD00168529
OKID007B
GCA_036247925.1ContigBLBV00000000
SAMD00168528
OKID038B
GCA_036247905.1ContigBLBX00000000
SAMD00168527
OKID205B
GCA_036247225.1ContigBLDM00000000
SAMD00168493
PWD332
GCA_036247205.1ContigBLDL00000000
SAMD00168492
PWD306
GCA_036247185.1ContigBLDK00000000
SAMD00168491
PWD304
GCA_036247165.1ContigBLDJ00000000
SAMD00168490
PWD289
GCA_036247085.1ContigBLDG00000000
SAMD00168487
PWD271
GCA_036247065.1ContigBLDF00000000
SAMD00168486
PWD261
GCA_036247005.1ContigBLDD00000000
SAMD00168484
PWD236
GCA_036247025.1ContigBLDE00000000
SAMD00168485
PWD256
GCA_036246965.1ContigBLDB00000000
SAMD00168482
PWD226
GCA_036246985.1ContigBLDC00000000
SAMD00168483
PWD231
GCA_036246945.1ContigBLDA00000000
SAMD00168481
PWD221
GCA_036246905.1ContigBLCY00000000
SAMD00168479
PWD207
GCA_036246885.1ContigBLCX00000000
SAMD00168478
PWD201
GCA_036246925.1ContigBLCZ00000000
SAMD00168480
PWD212
GCA_036246845.1ContigBLCV00000000
SAMD00168476
PWD193
GCA_036246865.1ContigBLCW00000000
SAMD00168477
PWD198
GCA_036246825.1ContigBLCU00000000
SAMD00168475
PWD188
GCA_036246805.1ContigBLCT00000000
SAMD00168474
PWD161
GCA_036246785.1ContigBLCS00000000
SAMD00168473
PWD157
GCA_036246765.1ContigBLCR00000000
SAMD00168472
PWD146
GCA_036246745.1ContigBLCQ00000000
SAMD00168471
PWD141
GCA_036246725.1ContigBLCP00000000
SAMD00168470
PWD136
GCA_036246705.1ContigBLES00000000
SAMD00168469
RGU130
GCA_036246685.1ContigBLCO00000000
SAMD00168468
PWD116
GCA_036246665.1ContigBLCN00000000
SAMD00168467
PWD111
GCA_036246645.1ContigBLCM00000000
SAMD00168466
PWD107
GCA_036246625.1ContigBLCL00000000
SAMD00168465
PWD101
GCA_036246605.1ContigBLCK00000000
SAMD00168464
PWD100
GCA_036246585.1ContigBLCJ00000000
SAMD00168463
PWD086
GCA_036246565.1ContigBLCI00000000
SAMD00168462
PWD076
GCA_036246545.1ContigBLCH00000000
SAMD00168461
PWD060
GCA_036246525.1ContigBLCG00000000
SAMD00168460
PWD051
GCA_036246505.1ContigBLCF00000000
SAMD00168459
PWD046
GCA_036246485.1ContigBLCE00000000
SAMD00168458
PWD041
GCA_036246465.1ContigBLCD00000000
SAMD00168457
PWD028
GCA_036246445.1ContigBLCC00000000
SAMD00168456
PWD021
GCA_036246425.1ContigBLCB00000000
SAMD00168455
PWD020
GCA_036246405.1ContigBLCA00000000
SAMD00168454
PWD011
GCA_036246385.1ContigBLBZ00000000
SAMD00168453
PWD006
GCA_036246365.1ContigBLBY00000000
SAMD00168452
PWD001
GCA_036247885.1ContigBLBW00000000
SAMD00168526
OKID201
GCA_036247865.1ContigBLBU00000000
SAMD00168525
OKID011A
GCA_036247845.1ContigBLER00000000
SAMD00168524
PWD596
GCA_036247825.1ContigBLEQ00000000
SAMD00168523
PWD591
GCA_036247805.1ContigBLEP00000000
SAMD00168522
PWD586
GCA_036247785.1ContigBLEO00000000
SAMD00168521
PWD581
GCA_036247765.1ContigBLEN00000000
SAMD00168520
PWD576
GCA_036247745.1ContigBLEM00000000
SAMD00168519
PWD571
GCA_036247725.1ContigBLEL00000000
SAMD00168518
PWD568
GCA_036247705.1ContigBLEK00000000
SAMD00168517
PWD563
GCA_036247685.1ContigBLEJ00000000
SAMD00168516
PWD556
GCA_036247665.1ContigBLEI00000000
SAMD00168515
PWD531
GCA_036247645.1ContigBLEH00000000
SAMD00168514
PWD521
GCA_036247625.1ContigBLEG00000000
SAMD00168513
PWD516
GCA_036247605.1ContigBLEF00000000
SAMD00168512
PWD511
GCA_036247585.1ContigBLEE00000000
SAMD00168511
PWD507
GCA_036247565.1ContigBLED00000000
SAMD00168510
PWD491
GCA_036247545.1ContigBLEC00000000
SAMD00168509
PWD486
GCA_036247525.1ContigBLEB00000000
SAMD00168508
PWD482
GCA_036247505.1ContigBLEA00000000
SAMD00168507
PWD476
GCA_036247485.1ContigBLDZ00000000
SAMD00168506
PWD467
GCA_036247465.1ContigBLDY00000000
SAMD00168505
PWD458
GCA_036247445.1ContigBLDX00000000
SAMD00168504
PWD431
GCA_036247425.1ContigBLDW00000000
SAMD00168503
PWD427
GCA_036247405.1ContigBLDV00000000
SAMD00168502
PWD421
GCA_036247385.1ContigBLDU00000000
SAMD00168501
PWD416
GCA_036247365.1ContigBLDT00000000
SAMD00168500
PWD371
GCA_036247345.1ContigBLDS00000000
SAMD00168499
PWD366
GCA_036247325.1ContigBLDR00000000
SAMD00168498
PWD361
GCA_036247305.1ContigBLDQ00000000
SAMD00168497
PWD356
GCA_036247285.1ContigBLDP00000000
SAMD00168496
PWD351
GCA_036247265.1ContigBLDO00000000
SAMD00168495
PWD349
GCA_036247245.1ContigBLDN00000000
SAMD00168494
PWD338

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    Enterobacteriaceae
    Whole genome sequencing of colistin-resistant Enterobacteriaceae isolated in Japan
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