ID 533291 - BioProject

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Accession: PRJNA533291 ID: 533291

Lactobacillus buchneri, Lactobacillus amylovorus, Lactobacillus casei, Lactobacillus curvatus, and Enterococcus hirae genome sequencing and assembly

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This project is a component of the The Lactobacillus genus, a use case for Bactopia.

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215 additional projects are components of the The Lactobacillus genus, a use case for Bactopia..

Whole genome sequences from Lactobacillus buchneri, Lactobacillus amylovorus, Lactobacillus casei, Lactobacillus curvatus, and Enterococcus hirae isolated from the nasopharynx of feedlot cattle

Accession	PRJNA533291
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Amat S et al., "Draft Genome Sequences of 14 Lactobacillus, Enterococcus, and Staphylococcus Isolates from the Nasopharynx of Healthy Feedlot Cattle", Microbiology Resource Announcements, 2019;8(34)
Submission	Registration date: 17-Apr-2019 Agriculture and Agri-Food Canada
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	719
WGS master	14
SRA Experiments	14
Protein Sequences	31956
Other datasets
BioSample	15
Assembly	14

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

14
14

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_005047985.1	SUMY00000000	SAMN11456257	S44	Enterococcus hirae
GCA_005049135.1	SUMT00000000	SAMN11456259	S49	Lacticaseibacillus paracasei
GCA_005049155.1	SUMN00000000	SAMN11456246	S60	Lactobacillus amylovorus
GCA_005049195.1	SUMW00000000	SAMN11456254	S46	Latilactobacillus curvatus
GCA_005049205.1	SUMO00000000	SAMN11456253	S59	Lentilactobacillus buchneri
GCA_005049245.1	SUMR00000000	SAMN11456251	S51	Lentilactobacillus buchneri
GCA_005049145.1	SUMZ00000000	SAMN11456247	S43	Lentilactobacillus buchneri
GCA_005048055.1	SUMV00000000	SAMN11456249	S47	Lentilactobacillus buchneri
GCA_005048025.1	SUNA00000000	SAMN11456255	S42	Lentilactobacillus buchneri
GCA_005047575.1	SUMP00000000	SAMN11456256	S58	Lentilactobacillus buchneri
GCA_005047285.1	SUMX00000000	SAMN11456248	S45	Lentilactobacillus buchneri
GCA_005047265.1	SUMQ00000000	SAMN11456252	S53	Lentilactobacillus buchneri
GCA_005047235.1	SUMS00000000	SAMN11456250	S50	Lentilactobacillus buchneri
GCA_005048075.1	SUMU00000000	SAMN11456258	S48	Staphylococcus chromogenes

SRA Data Details

Parameter	Value
Data volume, Gbases	4
Data volume, Mbytes	2221

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Lactobacillus buchneri, Lactobacillus amylovorus, Lactobacillus casei, Lactobacillus curvatus, and Enterococcus hirae genome sequencing and assembly

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