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Accession: PRJNA550038 ID: 550038

Ribosome profiling of Cryptococcus neoformans H99

We measured protein translation (by ribosome profiling) and RNA levels (by polyA-enriched RNA-seq) in Cryptococcus neoformans strain H99 and Cryptococcus neoformans strain JEC21. More...
AccessionPRJNA550038; GEO: GSE133125
ScopeMultispecies
PublicationsWallace EWJ et al., "Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom.", Nucleic Acids Res, 2020 Mar 18;48(5):2312-2331
Grants
  • "Mechanisms of Gene Silencing" (Grant ID R01 GM071801, National Institute of General Medical Sciences)
  • "Epigenetic control of virulence in a fungal meningitis pathogen" (Grant ID R01 AI120464, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 21-Jun-2019
Institute for Cell Biology, School of Biological Sciences, University of Edinburgh
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes245
SRA Data Details
ParameterValue
Data volume, Gbases68
Data volume, Mbytes44498

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