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Accession: PRJNA552582 ID: 552582

Metagenomics of a High Arctic glacier at the Villum Research Station in northeast Greenland

Surface ice (LF) and the nearby exposed soil (ES) were collected for metagenomics analyses at the "Little Firn" glacier (81. More...
AccessionPRJNA552582
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsZeng Y et al., "Potential Rhodopsin- and Bacteriochlorophyll-Based Dual Phototrophy in a High Arctic Glacier.", mBio, 2020 Nov 24;11(6)
Grants
  • "Searching for Photosynthetic Archaea in Arctic Permafrost" (Grant ID 17601, Villum Foundations)
SubmissionRegistration date: 3-Jul-2019
Aarhus University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)245
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample247
Assembly245
Assembly details:
Assembly levelNumber of Assemblies
245
245
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_014379215.1ContigJACMMF000000000SAMN14819094
ES-bin-79
GCA_014377905.1ContigJACMOQ000000000SAMN14819157
LF-bin-273
GCA_014377795.1ContigJACMOY000000000SAMN14819165
LF-bin-291
GCA_014377015.1ContigJACMQL000000000SAMN14819204
LF-bin-426
GCA_014377785.1ContigJACMOZ000000000SAMN14819166
LF-bin-295
GCA_014378035.1ContigJACMOM000000000SAMN14819153
LF-bin-25
GCA_014379305.1ContigJACMMB000000000SAMN14819090
ES-bin-6
GCA_014381185.1ContigJACMIK000000000SAMN14818994
ES-bin-101
GCA_014380805.1ContigJACMJC000000000SAMN14819012
ES-bin-148
GCA_014379235.1ContigJACMMD000000000SAMN14819092
ES-bin-76
GCA_014379495.1ContigJACMLQ000000000SAMN14819078
ES-bin-31
GCA_014379595.1ContigJACMLM000000000SAMN14819074
ES-bin-309
GCA_014378415.1ContigJACMNS000000000SAMN14819133
LF-bin-187
GCA_014376355.1ContigJACMRQ000000000SAMN14819235
LF-bin-95
GCA_014378295.1ContigJACMNY000000000SAMN14819139
LF-bin-1
GCA_014379275.1ContigJACMMA000000000SAMN14819089
ES-bin-63
GCA_014380815.1ContigJACMJB000000000SAMN14819011
ES-bin-147
GCA_014381035.1ContigJACMIS000000000SAMN14819002
ES-bin-12
GCA_014380985.1ContigJACMIU000000000SAMN14819004
ES-bin-131
GCA_014378525.1ContigJACMNL000000000SAMN14819126
LF-bin-166
GCA_014376445.1ContigJACMRM000000000SAMN14819231
LF-bin-6
GCA_014377485.1ContigJACMPM000000000SAMN14819179
LF-bin-345
GCA_014376805.1ContigJACMQU000000000SAMN14819213
LF-bin-458
GCA_014376525.1ContigJACMRI000000000SAMN14819227
LF-bin-500
GCA_014376345.1ContigJACMRS000000000SAMN14819237
LF-bin-98
GCA_014378485.1ContigJACMNO000000000SAMN14819129
LF-bin-173
GCA_014379485.1ContigJACMLS000000000SAMN14819080
ES-bin-35
GCA_014378765.1ContigJACMNA000000000SAMN14819115
LF-bin-127
GCA_014376435.1ContigJACMRL000000000SAMN14819230
LF-bin-57
GCA_014376935.1ContigJACMQO000000000SAMN14819207
LF-bin-439
GCA_014381095.1ContigJACMIL000000000SAMN14818995
ES-bin-103
GCA_014379815.1ContigJACMLA000000000SAMN14819062
ES-bin-282
GCA_014379395.1ContigJACMLV000000000SAMN14819084
ES-bin-46
GCA_014378645.1ContigJACMNG000000000SAMN14819121
LF-bin-14
GCA_014376335.1ContigJACMRR000000000SAMN14819236
LF-bin-97
GCA_014380905.1ContigJACMIW000000000SAMN14819006
ES-bin-134
GCA_014380445.1ContigJACMJW000000000SAMN14819032
ES-bin-183
GCA_014378555.1ContigJACMNN000000000SAMN14819128
LF-bin-172
GCA_014378085.1ContigJACMOJ000000000SAMN14819150
LF-bin-256
GCA_014379265.1ContigJACMMC000000000SAMN14819091
ES-bin-75
GCA_014379045.1ContigJACMMK000000000SAMN14819099
ES-bin-91
GCA_014380305.1ContigJACMKD000000000SAMN14819039
ES-bin-200
GCA_014379915.1ContigJACMKV000000000SAMN14819057
ES-bin-258
GCA_014377305.1ContigJACMPW000000000SAMN14819189
LF-bin-37
GCA_014377245.1ContigJACMPX000000000SAMN14819190
LF-bin-382
GCA_014381085.1ContigJACMIP000000000SAMN14818999
ES-bin-125
GCA_014381065.1ContigJACMIQ000000000SAMN14819000
ES-bin-127
GCA_014380105.1ContigJACMKL000000000SAMN14819047
ES-bin-223
GCA_014376695.1ContigJACMRA000000000SAMN14819219
LF-bin-483
GCA_014380225.1ContigJACMKI000000000SAMN14819044
ES-bin-214
GCA_014378965.1ContigJACMMR000000000SAMN14819106
LF-bin-100
GCA_014379165.1ContigJACMMG000000000SAMN14819095
ES-bin-7
GCA_014379985.1ContigJACMKS000000000SAMN14819054
ES-bin-240
GCA_014379635.1ContigJACMLL000000000SAMN14819073
ES-bin-308
GCA_014377695.1ContigJACMPA000000000SAMN14819167
LF-bin-299
GCA_014378615.1ContigJACMNI000000000SAMN14819123
LF-bin-156
GCA_014378905.1ContigJACMMU000000000SAMN14819109
LF-bin-118
GCA_014378825.1ContigJACMMX000000000SAMN14819112
LF-bin-121
GCA_014377005.1ContigJACMQK000000000SAMN14819203
LF-bin-424
GCA_014377345.1ContigJACMPT000000000SAMN14819186
LF-bin-358
GCA_014377575.1ContigJACMPH000000000SAMN14819174
LF-bin-328
GCA_014377525.1ContigJACMPL000000000SAMN14819178
LF-bin-340
GCA_014377055.1ContigJACMQJ000000000SAMN14819202
LF-bin-423
GCA_014377495.1ContigJACMPN000000000SAMN14819180
LF-bin-346
GCA_014378155.1ContigJACMOF000000000SAMN14819146
LF-bin-218
GCA_014377565.1ContigJACMPJ000000000SAMN14819176
LF-bin-338
GCA_014378235.1ContigJACMOB000000000SAMN14819142
LF-bin-206
GCA_014377765.1ContigJACMOX000000000SAMN14819164
LF-bin-289
GCA_014378655.1ContigJACMNF000000000SAMN14819120
LF-bin-145
GCA_014379785.1ContigJACMLD000000000SAMN14819065
ES-bin-292
GCA_014379965.1ContigJACMKU000000000SAMN14819056
ES-bin-252
GCA_014379345.1ContigJACMLY000000000SAMN14819087
ES-bin-54
GCA_014379565.1ContigJACMLP000000000SAMN14819077
ES-bin-317
GCA_014379515.1ContigJACMLR000000000SAMN14819079
ES-bin-34
GCA_014380425.1ContigJACMJX000000000SAMN14819033
ES-bin-184
GCA_014380545.1ContigJACMJP000000000SAMN14819025
ES-bin-175
GCA_014381115.1ContigJACMIN000000000SAMN14818997
ES-bin-119
GCA_014380515.1ContigJACMJS000000000SAMN14819028
ES-bin-17
GCA_014380685.1ContigJACMJK000000000SAMN14819020
ES-bin-160
GCA_014377635.1ContigJACMPE000000000SAMN14819171
LF-bin-313
GCA_014377395.1ContigJACMPS000000000SAMN14819185
LF-bin-356
GCA_014378955.1ContigJACMMQ000000000SAMN14819105
ES-bin-9
GCA_014380625.1ContigJACMJL000000000SAMN14819021
ES-bin-163
GCA_014376815.1ContigJACMQV000000000SAMN14819214
LF-bin-465
GCA_014376625.1ContigJACMRE000000000SAMN14819223
LF-bin-491
GCA_014376985.1ContigJACMQM000000000SAMN14819205
LF-bin-428
GCA_014379695.1ContigJACMLH000000000SAMN14819069
ES-bin-299
GCA_014379925.1ContigJACMKY000000000SAMN14819060
ES-bin-26
GCA_014376535.1ContigJACMRH000000000SAMN14819226
LF-bin-49
GCA_014380875.1ContigJACMJA000000000SAMN14819010
ES-bin-146
GCA_014378225.1ContigJACMOA000000000SAMN14819141
LF-bin-203
GCA_014380135.1ContigJACMKN000000000SAMN14819049
ES-bin-228
GCA_014379125.1ContigJACMMJ000000000SAMN14819098
ES-bin-90
GCA_014380975.1ContigJACMIT000000000SAMN14819003
ES-bin-130
GCA_014380345.1ContigJACMKC000000000SAMN14819038
ES-bin-196
GCA_014377705.1ContigJACMPC000000000SAMN14819169
LF-bin-300
GCA_014378405.1ContigJACMNT000000000SAMN14819134
LF-bin-189
GCA_014377975.1ContigJACMOO000000000SAMN14819155
LF-bin-269
GCA_014379625.1ContigJACMLJ000000000SAMN14819071
ES-bin-300
GCA_014379905.1ContigJACMKX000000000SAMN14819059
ES-bin-269
GCA_014379535.1ContigJACMLO000000000SAMN14819076
ES-bin-316
GCA_014376505.1ContigJACMRK000000000SAMN14819229
LF-bin-54
GCA_014377125.1ContigJACMQF000000000SAMN14819198
LF-bin-406
GCA_014377385.1ContigJACMPR000000000SAMN14819184
LF-bin-355
GCA_014381025.1ContigJACMIR000000000SAMN14819001
ES-bin-129
GCA_014380605.1ContigJACMJO000000000SAMN14819024
ES-bin-173
GCA_014377225.1ContigJACMQA000000000SAMN14819193
LF-bin-398
GCA_014377455.1ContigJACMPO000000000SAMN14819181
LF-bin-351
GCA_014376745.1ContigJACMQY000000000SAMN14819217
LF-bin-477
GCA_014379405.1ContigJACMLU000000000SAMN14819083
ES-bin-45
GCA_014378065.1ContigJACMOK000000000SAMN14819151
LF-bin-258
GCA_014378025.1ContigJACMOL000000000SAMN14819152
LF-bin-259
GCA_014378745.1ContigJACMNC000000000SAMN14819117
LF-bin-139
GCA_014378325.1ContigJACMNX000000000SAMN14819138
LF-bin-197
GCA_014376685.1ContigJACMRB000000000SAMN14819220
LF-bin-484
GCA_014380055.1ContigJACMKP000000000SAMN14819051
ES-bin-231
GCA_014380785.1ContigJACMJE000000000SAMN14819014
ES-bin-14
GCA_014379705.1ContigJACMLI000000000SAMN14819070
ES-bin-29
GCA_014379355.1ContigJACMLX000000000SAMN14819086
ES-bin-51
GCA_014379205.1ContigJACMME000000000SAMN14819093
ES-bin-78
GCA_014378185.1ContigJACMOE000000000SAMN14819145
LF-bin-215
GCA_014377535.1ContigJACMPK000000000SAMN14819177
LF-bin-339
GCA_014377145.1ContigJACMQE000000000SAMN14819197
LF-bin-405
GCA_014380935.1ContigJACMIX000000000SAMN14819007
ES-bin-141
GCA_014379585.1ContigJACMLN000000000SAMN14819075
ES-bin-313
GCA_014380705.1ContigJACMJI000000000SAMN14819018
ES-bin-155
GCA_014377845.1ContigJACMOV000000000SAMN14819162
LF-bin-285
GCA_014377155.1ContigJACMQD000000000SAMN14819196
LF-bin-404
GCA_014377205.1ContigJACMQB000000000SAMN14819194
LF-bin-399
GCA_014376645.1ContigJACMRD000000000SAMN14819222
LF-bin-489
GCA_014380715.1ContigJACMJH000000000SAMN14819017
ES-bin-153
GCA_014376855.1ContigJACMQS000000000SAMN14819211
LF-bin-449
GCA_014380565.1ContigJACMJQ000000000SAMN14819026
ES-bin-176
GCA_014380505.1ContigJACMJT000000000SAMN14819029
ES-bin-180
GCA_014379315.1ContigJACMLZ000000000SAMN14819088
ES-bin-56
GCA_014378995.1ContigJACMMP000000000SAMN14819104
ES-bin-98
GCA_014380065.1ContigJACMKO000000000SAMN14819050
ES-bin-22
GCA_014378945.1ContigJACMMT000000000SAMN14819108
LF-bin-113
GCA_014377325.1ContigJACMPV000000000SAMN14819188
LF-bin-369
GCA_014380115.1ContigJACMKK000000000SAMN14819046
ES-bin-219
GCA_014378425.1ContigJACMNR000000000SAMN14819132
LF-bin-183
GCA_014376845.1ContigJACMQT000000000SAMN14819212
LF-bin-456
GCA_014380485.1ContigJACMJU000000000SAMN14819030
ES-bin-181
GCA_014380385.1ContigJACMJY000000000SAMN14819034
ES-bin-185
GCA_014378915.1ContigJACMMS000000000SAMN14819107
LF-bin-10
GCA_014378845.1ContigJACMNB000000000SAMN14819116
LF-bin-133
GCA_014378495.1ContigJACMNP000000000SAMN14819130
LF-bin-174
GCA_014378875.1ContigJACMMW000000000SAMN14819111
LF-bin-11
GCA_014378715.1ContigJACMNE000000000SAMN14819119
LF-bin-143
GCA_014376705.1ContigJACMQZ000000000SAMN14819218
LF-bin-481
GCA_014377425.1ContigJACMPQ000000000SAMN14819183
LF-bin-354
GCA_014378805.1ContigJACMMY000000000SAMN14819113
LF-bin-123
GCA_014376655.1ContigJACMRC000000000SAMN14819221
LF-bin-485
GCA_014380045.1ContigJACMKQ000000000SAMN14819052
ES-bin-234
GCA_014380655.1ContigJACMJN000000000SAMN14819023
ES-bin-168
GCA_014379455.1ContigJACMLT000000000SAMN14819081
ES-bin-41
GCA_014377165.1ContigJACMQC000000000SAMN14819195
LF-bin-401
GCA_014376785.1ContigJACMQW000000000SAMN14819215
LF-bin-469
GCA_014376365.1ContigJACMRT000000000SAMN14819238
LF-bin-99
GCA_014378465.1ContigJACMNQ000000000SAMN14819131
LF-bin-178
GCA_014378195.1ContigJACMOC000000000SAMN14819143
LF-bin-20
GCA_014377445.1ContigJACMPP000000000SAMN14819182
LF-bin-353
GCA_014376585.1ContigJACMRG000000000SAMN14819225
LF-bin-497
GCA_014380285.1ContigJACMKE000000000SAMN14819040
ES-bin-202
GCA_014380465.1ContigJACMJV000000000SAMN14819031
ES-bin-182
GCA_014377775.1ContigJACMOW000000000SAMN14819163
LF-bin-288
GCA_014377665.1ContigJACMPF000000000SAMN14819172
LF-bin-319
GCA_014378705.1ContigJACMND000000000SAMN14819118
LF-bin-141
GCA_014378865.1ContigJACMMV000000000SAMN14819110
LF-bin-119
GCA_014376565.1ContigJACMRJ000000000SAMN14819228
LF-bin-53
GCA_014380825.1ContigJACMJD000000000SAMN14819013
ES-bin-149
GCA_014379105.1ContigJACMML000000000SAMN14819100
ES-bin-92
GCA_014379025.1ContigJACMMO000000000SAMN14819103
ES-bin-95
GCA_014379385.1ContigJACMLW000000000SAMN14819085
ES-bin-47
GCA_014379445.1ContigJACNFG000000000SAMN14819082
ES-bin-42
GCA_014379175.1ContigJACMMH000000000SAMN14819096
ES-bin-83
GCA_014380755.1ContigJACMJF000000000SAMN14819015
ES-bin-150
GCA_014378665.1ContigJACMNH000000000SAMN14819122
LF-bin-153
GCA_014377925.1ContigJACMOR000000000SAMN14819158
LF-bin-274
GCA_014378205.1ContigJACMOD000000000SAMN14819144
LF-bin-211
GCA_014377965.1ContigJACMOP000000000SAMN14819156
LF-bin-272
GCA_014376885.1ContigJACMQR000000000SAMN14819210
LF-bin-444
GCA_014377595.1ContigJACMPI000000000SAMN14819175
LF-bin-337
GCA_014380255.1ContigJACMKG000000000SAMN14819042
ES-bin-20
GCA_014378775.1ContigJACMMZ000000000SAMN14819114
LF-bin-124
GCA_014376905.1ContigJACMQQ000000000SAMN14819209
LF-bin-441
GCA_014376325.1ContigJACMRP000000000SAMN14819234
LF-bin-93
GCA_014380745.1ContigJACMJG000000000SAMN14819016
ES-bin-151
GCA_014378105.1ContigJACMOI000000000SAMN14819149
LF-bin-240
GCA_014378285.1ContigJACMNZ000000000SAMN14819140
LF-bin-200
GCA_014378345.1ContigJACMNW000000000SAMN14819137
LF-bin-196
GCA_014378605.1ContigJACMNJ000000000SAMN14819124
LF-bin-160
GCA_014377085.1ContigJACMQH000000000SAMN14819200
LF-bin-416
GCA_014380365.1ContigJACMJZ000000000SAMN14819035
ES-bin-189
GCA_014379745.1ContigJACMLF000000000SAMN14819067
ES-bin-295
GCA_014379795.1ContigJACMLC000000000SAMN14819064
ES-bin-285
GCA_014379075.1ContigJACMMN000000000SAMN14819102
ES-bin-94
GCA_014379135.1ContigJACMMI000000000SAMN14819097
ES-bin-85
GCA_014377995.1ContigJACMON000000000SAMN14819154
LF-bin-262
GCA_014376765.1ContigJACMQX000000000SAMN14819216
LF-bin-46
GCA_014376915.1ContigJACMQP000000000SAMN14819208
LF-bin-440
GCA_014377105.1ContigJACMQG000000000SAMN14819199
LF-bin-413
GCA_014378585.1ContigJACMNK000000000SAMN14819125
LF-bin-161
GCA_014378545.1ContigJACMNM000000000SAMN14819127
LF-bin-167
GCA_014380155.1ContigJACMKJ000000000SAMN14819045
ES-bin-216
GCA_014379885.1ContigJACMKW000000000SAMN14819058
ES-bin-268
GCA_014380555.1ContigJACMJR000000000SAMN14819027
ES-bin-179
GCA_014380965.1ContigJACMIV000000000SAMN14819005
ES-bin-132
GCA_014379865.1ContigJACMKZ000000000SAMN14819061
ES-bin-281
GCA_014378355.1ContigJACMNV000000000SAMN14819136
LF-bin-195
GCA_014378385.1ContigJACMNU000000000SAMN14819135
LF-bin-192
GCA_014377745.1ContigJACMPB000000000SAMN14819168
LF-bin-29
GCA_014379805.1ContigJACMLB000000000SAMN14819063
ES-bin-283
GCA_014380005.1ContigJACMKT000000000SAMN14819055
ES-bin-250
GCA_014381165.1ContigJACMIM000000000SAMN14818996
ES-bin-105
GCA_014376425.1ContigJACMRO000000000SAMN14819233
LF-bin-79
GCA_014379765.1ContigJACMLE000000000SAMN14819066
ES-bin-294
GCA_014377865.1ContigJACMOS000000000SAMN14819159
LF-bin-278
GCA_014377265.1ContigJACMPY000000000SAMN14819191
LF-bin-385
GCA_014377355.1ContigJACMPU000000000SAMN14819187
LF-bin-363
GCA_014379065.1ContigJACMMM000000000SAMN14819101
ES-bin-93
GCA_014379665.1ContigJACMLK000000000SAMN14819072
ES-bin-305
GCA_014380615.1ContigJACMJM000000000SAMN14819022
ES-bin-166
GCA_014379685.1ContigJACMLG000000000SAMN14819068
ES-bin-298
GCA_014380205.1ContigJACMKH000000000SAMN14819043
ES-bin-213
GCA_014377275.1ContigJACMPZ000000000SAMN14819192
LF-bin-393
GCA_014377625.1ContigJACMPG000000000SAMN14819173
LF-bin-320
GCA_014380315.1ContigJACMKB000000000SAMN14819037
ES-bin-194
GCA_014380375.1ContigJACMKA000000000SAMN14819036
ES-bin-191
GCA_014380145.1ContigJACMKM000000000SAMN14819048
ES-bin-225
GCA_014377675.1ContigJACMPD000000000SAMN14819170
LF-bin-309
GCA_014377915.1ContigJACMOT000000000SAMN14819160
LF-bin-280
GCA_014377875.1ContigJACMOU000000000SAMN14819161
LF-bin-283
GCA_014385455.1ContigJACMJJ000000000SAMN14819019
ES-bin-159
GCA_014378095.1ContigJACMOH000000000SAMN14819148
LF-bin-223
GCA_014376955.1ContigJACMQN000000000SAMN14819206
LF-bin-430
GCA_014376575.1ContigJACMRF000000000SAMN14819224
LF-bin-492
GCA_014380025.1ContigJACMKR000000000SAMN14819053
ES-bin-238
GCA_014376455.1ContigJACMRN000000000SAMN14819232
LF-bin-77
GCA_014380925.1ContigJACMIY000000000SAMN14819008
ES-bin-144
GCA_014380865.1ContigJACMIZ000000000SAMN14819009
ES-bin-145
GCA_014380245.1ContigJACMKF000000000SAMN14819041
ES-bin-207
GCA_014378125.1ContigJACMOG000000000SAMN14819147
LF-bin-21
GCA_014381105.1ContigJACMIO000000000SAMN14818998
ES-bin-123
GCA_014377045.1ContigJACMQI000000000SAMN14819201
LF-bin-417
SRA Data Details
ParameterValue
Data volume, Gbases460
Data volume, Tbytes0.22

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