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Accession: PRJNA566188 ID: 566188

Alca torda (Razorbill) genome assembly

See Genome Information for Alca torda
The raw data and assembly of this submission are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy. The Razorbill is a colonical seabird and it is the closest living relative of the extinct great auk (Pinguinis impennis). The sample was provided by Copenhagen Zoological Museum and this reference assembly of has been produced as part of the G10K-VGP Project. Genome sequencing was conducted Olivier Fedrigo's group at the Rockefeller University Vertebrate Genome Lab. The genome assembly was conducted by the G10K-VGP group, by Arang Rhie and Sergey Koren of Adam Phillippy's lab at NIH. Manual curation of chromosomes and other genomic features was conducted by the gEVAL group led by Kerstin Howe at the Sanger Institute. More...
AccessionPRJNA566188
TypeUmbrella project
OrganismAlca torda[Taxonomy ID: 28689]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Alca; Alca torda
SubmissionRegistration date: 18-Sep-2019
G10K
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)29
WGS master2
SRA Experiments15
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases262
Data volume, Mbytes87418
This project encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Contigs
Total

1
1
2
BioProject
accession
Assembly
level
OrganismTitle
PRJNA554521 ContigsAlca tordaAlca torda (Razorbill) genome assembly, alternate haplotype, bAlcTor1 (G10K)
PRJNA554520 ChromosomesAlca tordaAlca torda(Razorbill) genome assembly, primary haplotype, bAlcTor1 (G10K)

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