Different RNA Virus species (ID 578816) - BioProject

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Accession: PRJNA578816 ID: 578816

Different RNA Virus species

Metagenomic sequencing with spiked primer enrichment (MSSPE)

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This project is a component of the Viral pathogen detection and discovery by clinical metagenomics

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18 additional projects are components of the Viral pathogen detection and discovery by clinical metagenomics.

The goal of this project is to evaluate MSSPE method for enrichment of viral reads for clinical diagnostics and genome surveillance for a variety of RNA viruses (described in Target multi-species).

Accession	PRJNA578816
Data Type	Raw sequence reads
Scope	Multispecies
Submission	Registration date: 22-Oct-2019 NIH - University of California San Francisco
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	319
Other datasets
BioSample	319

SRA Data Details

Parameter	Value
Data volume, Gbases	75
Data volume, Mbytes	50213

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Different RNA Virus species
Different RNA Virus species
Metagenomic sequencing with spiked primer enrichment (MSSPE)

BioProject
RecName: Full=Ankyrin repeat and SOCS box protein 2; Short=ASB-2
RecName: Full=Ankyrin repeat and SOCS box protein 2; Short=ASB-2
gi|81889655|sp|Q5U2S6.1|ASB2_RAT

Protein
RecName: Full=Aryl-hydrocarbon-interacting protein-like 1
RecName: Full=Aryl-hydrocarbon-interacting protein-like 1
gi|12229627|sp|Q9JLG9.1|AIPL1_RAT

Protein
RecName: Full=Protein BTG1; AltName: Full=Anti-proliferative factor; AltName: Fu...
RecName: Full=Protein BTG1; AltName: Full=Anti-proliferative factor; AltName: Full=B-cell translocation gene 1 protein
gi|2493361|sp|Q63073.1|BTG1_RAT

Protein

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