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Genome Information for Dictyostelium discoideum
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3 additional projects are components of the Cell and molecular transitions during efficient dedifferentiation.
Transcriptomic analysis of dedifferentiation in Dictyostelium discoideum, with comparison to forward development
Overall design: RNAseq timecourses sampling the dedifferentiation of 14h developed cells in two different nutrient conditions; liquid growth media (Media, 0 to 18 h) and Klebsiella bacteria (Bacteria, 0 to 24 h), compared with mock dedifferentiation in phosphate buffer (Buffer, 0 to 6 h), a reference sample of undifferentiated cells (Undifferentiated) and a timecourse of forward development (Development, 0 to 14 h). All timecourses performed in duplicate.
| Accession | PRJNA605216; GEO: GSE144888 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Dictyostelium discoideum[Taxonomy ID: 44689] Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum |
| Publications | Nichols JM et al., "Cell and molecular transitions during efficient dedifferentiation.", Elife, 2020 Apr 7;9 |
| Submission | Registration date: 6-Feb-2020
MRC Laboratory for Molecular Cell Biology, University College London |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 84 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 84 |
| GEO DataSets | 1 |