Shewanella xiamenensis (ID 615142) - BioProject

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Accession: PRJDB9531 ID: 615142

Shewanella xiamenensis

Whole genome sequencing of antimicrobial-resistant bacteria isolated in Vietnam

See Genome Information for Shewanella xiamenensis

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14 additional projects are related by organism.

Antimicrobial-resistant bacteria are a serious threat to public health. In this study, we performed whole genome sequencing of antimicrobial-resistant bacteria isolated in Vietnam.

Accession	PRJDB9531
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Shewanella xiamenensis[Taxonomy ID: 332186] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella xiamenensis
Submission	Registration date: 11-Apr-2020 AMR Research Center, National Institute of Infectious Diseases

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	432
WGS master	3
SRA Experiments	6
Other datasets
BioSample	6
Assembly	3

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

3
3

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_012490345.1	BLRE00000000	SAMD00215989	SxND_W2_2018	Shewanella xiamenensis
GCA_012490465.1	BLRF00000000	SAMD00215990	SxND_W5_2018	Shewanella xiamenensis
GCA_012490605.1	BLRG00000000	SAMD00215991	SxND_W9_2018	Shewanella xiamenensis

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	5728

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Shewanella xiamenensis
Shewanella xiamenensis
Whole genome sequencing of antimicrobial-resistant bacteria isolated in Vietnam

BioProject
RecName: Full=Cuticle collagen bli-1; AltName: Full=Blistered cuticle protein 1;...
RecName: Full=Cuticle collagen bli-1; AltName: Full=Blistered cuticle protein 1; Flags: Precursor
gi|115502367|sp|Q09457.2|BLI1_CAEEL

Protein
RecName: Full=Large ribosomal subunit protein uL5; AltName: Full=60S ribosomal p...
RecName: Full=Large ribosomal subunit protein uL5; AltName: Full=60S ribosomal protein L11
gi|51704334|sp|Q9CXW4.4|RL11_MOUSE

Protein
RecName: Full=Developmentally-regulated GTP-binding protein 2; Short=DRG-2; AltN...
RecName: Full=Developmentally-regulated GTP-binding protein 2; Short=DRG-2; AltName: Full=Translation factor GTPase DRG2; Short=TRAFAC GTPase DRG2
gi|8928105|sp|Q9QXB9.1|DRG2_MOUSE

Protein
bgnt-1.2 B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [Caenorhabdi...
bgnt-1.2 B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [Caenorhabditis elegans]
Gene ID:184865

Gene

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Shewanella xiamenensis

Whole genome sequencing of antimicrobial-resistant bacteria isolated in Vietnam

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