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Accession: PRJNA62343 ID: 62343

Human Skin Microbiome in Disease States

Gene-Environment Interactions at the Skin Surface - Demonstration project for Human Microbiome Project (HMP)

AccessionPRJNA62343
TypeUmbrella Metagenome project (Subtype:Metagenome)
Organismhuman skin metagenome[Taxonomy ID: 539655]
unclassified sequences; metagenomes; organismal metagenomes; human skin metagenome
SubmissionRegistration date: 2-Feb-2011
NISC - NIH Intramural Sequencing Center
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)300226
WGS master654
Genomic DNA297335
Map3
SRA Experiments4660
Protein Sequences79357
Publications
PubMed8
PMC8
Other datasets
BioSample5921
Genotype and Phenotype (dbGaP)1
Assembly655
SRA Data Details
ParameterValue
Data volume, Gbases6,206
Data volume, Tbytes3.19
Human Skin Microbiome in Disease States encompasses the following 31 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Complete genome
Contigs
Total

1
30
31
BioProject
accession
Assembly
level
OrganismTitle
PRJNA86759 ContigsStaphylococcus epidermidis NIH04003Human Microbiome Project (HMP) Reference Genomes Demo project (NIH-NISC)
PRJNA62395 ContigsStaphylococcus epidermidis NIH04008Reference genome for Human Microbiome Project (NISC - NIH Intramural Sequencing...)
PRJNA62391 ContigsStaphylococcus epidermidis NIH05001Reference genome for Human Microbiome Project (NISC - NIH Intramural Sequencing...)
PRJNA86761 ContigsStaphylococcus epidermidis NIH05003Human Microbiome Project (HMP) Reference Genomes Demo project (NIH-NISC)
PRJNA62389 ContigsStaphylococcus epidermidis NIH05005Reference genome for Human Microbiome Project (NISC - NIH Intramural Sequencing...)
List all 31 'Genome sequencing' projects...

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