Shotgun metagenome sequencing from textile industr... (ID 655112) - BioProject

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Accession: PRJNA655112 ID: 655112

Shotgun metagenome sequencing from textile industry effluents

Textile industry wastewater effluent dominated by Shewanellaceae, Bacteroidaceae and Pseudomonadaceae harbouring genes encoding catalytic enzymes for textile dye degradation potential from Gujarat, India

Textile industry wastewater effluent dominated by Shewanellaceae, Bacteroidaceae and Pseudomonadaceae harbouring genes encoding catalytic enzymes for textile dye degradation potential from Gujarat, India

Accession	PRJNA655112
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	wastewater metagenome[Taxonomy ID: 527639] unclassified sequences; metagenomes; ecological metagenomes; wastewater metagenome
Publications	Published online: Kumar D et al., "Textile Industry Wastewaters From Jetpur, Gujarat, India, Are Dominated by Shewanellaceae, Bacteroidaceae, and Pseudomonadaceae Harboring Genes Encoding Catalytic Enzymes for Textile Dye Degradation", Frontiers in Environmental Science, 2021;9
Submission	Registration date: 14-Dec-2021 Gujarat Biotechnology Research Centre
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	61
SRA Experiments	9
Other datasets
BioSample	70
Assembly	61

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

8
53
61

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_021209445.1	JAJOIH000000000	SAMN23440118	S1C1726	Acholeplasmataceae bacterium
GCA_021209335.1	JAJOIN000000000	SAMN23440124	S2C1553	Aeromonadaceae bacterium
GCA_021209265.1	JAJOIR000000000	SAMN23440128	S3C1480	Aliarcobacter cryaerophilus
GCA_021208245.1	JAJOJV000000000	SAMN23440158	S7C1556	Alkalibacterium thalassium
GCA_021208225.1	JAJOJX000000000	SAMN23440160	S7C3873	Alphaproteobacteria bacterium
GCA_021208265.1	JAJOJU000000000	SAMN23440157	S7C1514	Alphaproteobacteria bacterium
GCA_021209145.1	JAJOIV000000000	SAMN23440132	S4C1514	Alphaproteobacteria bacterium
GCA_021208765.1	JAJOJG000000000	SAMN23440143	S5C1514	Alphaproteobacteria bacterium
GCA_021209505.1	JAJOIE000000000	SAMN23440115	S1C1540	Alphaproteobacteria bacterium
GCA_021209585.1	JAJOIB000000000	SAMN23440112	S1C1495	Alphaproteobacteria bacterium
GCA_021209565.1	JAJOID000000000	SAMN23440114	S1C1514	Alphaproteobacteria bacterium
GCA_021208445.1	JAJOJO000000000	SAMN23440151	S6C1905	Bacillaceae bacterium
GCA_021209485.1	JAJOIG000000000	SAMN23440117	S1C1685	Bacilli bacterium
GCA_021208645.1	JAJOJL000000000	SAMN23440148	S6C1421	Bacillus sp. (in: firmicutes)
GCA_021208395.1	JAJOJT000000000	SAMN23440156	S7C1509	Bacteroides graminisolvens
GCA_021209545.1	JAJOIC000000000	SAMN23440113	S1C1509	Bacteroides graminisolvens
GCA_021209325.1	JAJOIO000000000	SAMN23440125	S2C1610	Bacteroides graminisolvens
GCA_021209365.1	JAJOIM000000000	SAMN23440123	S2C1497	Bacteroides graminisolvens
GCA_021206655.1	JAJOKE000000000	SAMN23440167	S9C1509	Bacteroides graminisolvens
GCA_021209605.1	JAJOIA000000000	SAMN23440111	S1C1415	Burkholderiaceae bacterium
GCA_021208465.1	JAJOJQ000000000	SAMN23440153	S7C1415	Burkholderiaceae bacterium
GCA_021208585.1	JAJOJM000000000	SAMN23440149	S6C1586	Burkholderiaceae bacterium
GCA_021208425.1	JAJOJR000000000	SAMN23440154	S7C1431	Burkholderiaceae bacterium
GCA_021208885.1	JAJOJF000000000	SAMN23440142	S5C1415	Burkholderiaceae bacterium
GCA_021209155.1	JAJOIU000000000	SAMN23440131	S4C1415	Burkholderiaceae bacterium
GCA_021206555.1	JAJOKA000000000	SAMN23440163	S8C1561	Candidatus Cloacimonadota bacterium
GCA_021208345.1	JAJOJW000000000	SAMN23440159	S7C161	Candidatus Paceibacterota bacterium
GCA_021209085.1	JAJOIX000000000	SAMN23440134	S4C161	Candidatus Paceibacterota bacterium
GCA_021208725.1	JAJOJH000000000	SAMN23440144	S5C161	Candidatus Paceibacterota bacterium
GCA_021209525.1	JAJOIF000000000	SAMN23440116	S1C161	Candidatus Paceibacterota bacterium
GCA_021209465.1	JAJOII000000000	SAMN23440119	S1C3343	Candidatus Saccharibacteria bacterium
GCA_021209405.1	JAJOIK000000000	SAMN23440121	S1C87	Candidatus Woesebacteria bacterium
GCA_021208925.1	JAJOJC000000000	SAMN23440139	S4C87	Candidatus Woesebacteria bacterium
GCA_021208605.1	JAJOJK000000000	SAMN23440147	S5C87	Candidatus Woesebacteria bacterium
GCA_021208155.1	JAJOJZ000000000	SAMN23440162	S7C87	Candidatus Woesebacteria bacterium
GCA_021209005.1	JAJOIZ000000000	SAMN23440136	S4C1888	Chitinophagales bacterium
GCA_021208385.1	JAJOJS000000000	SAMN23440155	S7C1486	Clostridiales bacterium
GCA_021208125.1	JAJOKC000000000	SAMN23440165	S8C857	Desertifilum sp.
GCA_021209625.1	JAJOHZ000000000	SAMN23440110	S1C1392	Erysipelotrichaceae bacterium
GCA_021208865.1	JAJOJE000000000	SAMN23440141	S5C1392	Erysipelotrichaceae bacterium
GCA_021208785.1	JAJOJI000000000	SAMN23440145	S5C547	Flavobacterium sp.
GCA_021209025.1	JAJOJA000000000	SAMN23440137	S4C547	Flavobacterium sp.
GCA_021208965.1	JAJOJD000000000	SAMN23440140	S5C1339	Gammaproteobacteria bacterium
GCA_021209185.1	JAJOIT000000000	SAMN23440130	S4C1339	Gammaproteobacteria bacterium
GCA_021208455.1	JAJOJP000000000	SAMN23440152	S7C1339	Gammaproteobacteria bacterium
GCA_021209645.1	JAJOHY000000000	SAMN23440109	S1C1339	Gammaproteobacteria bacterium
GCA_021209425.1	JAJOIJ000000000	SAMN23440120	S1C841	Geovibrio sp.
GCA_021208185.1	JAJOJY000000000	SAMN23440161	S7C841	Geovibrio sp.
GCA_021209045.1	JAJOIY000000000	SAMN23440135	S4C1656	Leadbetterella sp.
GCA_021208565.1	JAJOJN000000000	SAMN23440150	S6C1758	Nitrincola sp.
GCA_021206435.1	JAJOKF000000000	SAMN23440168	S9C1617	Parabacteroides chartae
GCA_021208985.1	JAJOJB000000000	SAMN23440138	S4C81	Saccharospirillaceae bacterium
GCA_021208685.1	JAJOJJ000000000	SAMN23440146	S5C81	Saccharospirillaceae bacterium
GCA_021209385.1	JAJOIL000000000	SAMN23440122	S2C1195	Seleniivibrio sp.
GCA_021206475.1	JAJOKD000000000	SAMN23440166	S9C1504	Shewanella fodinae
GCA_021209245.1	JAJOIS000000000	SAMN23440129	S3C505	Shewanella xiamenensis
GCA_021209305.1	JAJOIP000000000	SAMN23440126	S2C505	Shewanella xiamenensis
GCA_021209285.1	JAJOIQ000000000	SAMN23440127	S2C617	Sulfurospirillum cavolei
GCA_021206415.1	JAJOKG000000000	SAMN23440169	S9C671	Sulfurospirillum sp.
GCA_021208135.1	JAJOKB000000000	SAMN23440164	S8C1768	Verrucomicrobiota bacterium
GCA_021209225.1	JAJOIW000000000	SAMN23440133	S4C1562	Verrucomicrobiota bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	10
Data volume, Mbytes	7737

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Shotgun metagenome sequencing from textile industry effluents

Textile industry wastewater effluent dominated by Shewanellaceae, Bacteroidaceae and Pseudomonadaceae harbouring genes encoding catalytic enzymes for textile dye degradation potential from Gujarat, India

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