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Accession: PRJDB10511 ID: 661486

cellular organisms

De novo sequencing and analysis for CCM strains in GCM 10K project

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This project is a component of the The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing project
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137 additional projects are components of the The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing project.
The project aims to sequence and analyse several strain submitted by CCM (before Jul. More...
AccessionPRJDB10511
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsWu L et al., "The Global Catalogue of Microorganisms (GCM) 10K type strain sequencing project: providing services to taxonomists for standard genome sequencing and annotation.", Int J Syst Evol Microbiol, 2019 Apr;69(4):895-898
SubmissionRegistration date: 3-Sep-2020
WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)953
WGS master47
Protein Sequences151618
Publications
PubMed1
Other datasets
BioSample168
Assembly47
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
21
26
47
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_014635545.1ScaffoldBMDA00000000SAMD00244867
CCM 8635
Acinetobacter courvalinii
GCA_014636095.1ScaffoldBMDV00000000SAMD00244890
CCM 8639
Acinetobacter modestus
GCA_014635885.1ContigBMDR00000000SAMD00244885
CCM 8642
Acinetobacter vivianii
GCA_014635245.1ContigBMCP00000000SAMD00244855
CCM 7684
Agaricicola taiwanensis
GCA_014635805.1ScaffoldBMDN00000000SAMD00244880
CCM 7623
Agromyces flavus
GCA_014635085.1ScaffoldBMCH00000000SAMD00244847
CCM 7132
Asaia siamensis
GCA_014635325.1ScaffoldBMCT00000000SAMD00244859
CCM 7897
Azorhizobium oxalatiphilum
GCA_014635485.1ScaffoldBMCX00000000SAMD00244864
CCM 8517
Corynebacterium pelargi
GCA_014635985.1ContigBMDT00000000SAMD00244887
CCM 8433
Enterococcus alcedinis
GCA_014635405.1ScaffoldBMCW00000000SAMD00244863
CCM 8490
Epilithonimonas arachidiradicis
GCA_014635025.1ContigBMCE00000000SAMD00244844
CCM 4982
Fictibacillus barbaricus
GCA_014635685.1ContigBMDH00000000SAMD00244874
CCM 8606
Galliscardovia ingluviei
GCA_014635105.1ContigBMCI00000000SAMD00244848
CCM 7217
Haloferax sulfurifontis
GCA_014635665.1ContigBMDG00000000SAMD00244873
CCM 8653
Isoptericola cucumis
GCA_014635205.1ContigBMCN00000000SAMD00244853
CCM 7679
Jeotgalicoccus aerolatus
GCA_014635225.1ContigBMCO00000000SAMD00244854
CCM 7682
Jeotgalicoccus coquinae
GCA_014635365.1ContigBMCV00000000SAMD00244861
CCM 8403
Lactobacillus apis
GCA_014635905.1ContigBMDS00000000SAMD00244886
CCM 8609
Limosilactobacillus caviae
GCA_014634985.1ContigBMCC00000000SAMD00244842
CCM 4809
Macrococcus hajekii
GCA_014635785.1ScaffoldBMDM00000000SAMD00244879
CCM 7717
Mammaliicoccus stepanovicii
GCA_014635645.1ScaffoldBMDF00000000SAMD00244872
CCM 4481
Mammaliicoccus vitulinus
GCA_014635005.1ScaffoldBMCD00000000SAMD00244843
CCM 4955
Microbacterium aerolatum
GCA_014635185.1ScaffoldBMCM00000000SAMD00244852
CCM 7640
Microbacterium murale
GCA_014635825.1ContigBMDO00000000SAMD00244881
CCM 8711
Mucilaginibacter galii
GCA_014635525.1ContigBMCZ00000000SAMD00244866
CCM 8625
Mucilaginibacter phyllosphaerae
GCA_014635145.1ScaffoldBMCK00000000SAMD00244850
CCM 7403
Nocardioides daphniae
GCA_014635705.1ScaffoldBMDI00000000SAMD00244875
CCM 2767
Oxalicibacterium faecigallinarum
GCA_014635065.1ContigBMCG00000000SAMD00244846
CCM 7086
Oxalicibacterium flavum
GCA_014635845.1ContigBMDP00000000SAMD00244882
CCM 7664
Oxalicibacterium solurbis
GCA_014635265.1ContigBMCQ00000000SAMD00244856
CCM 7698
Paenalcaligenes hominis
GCA_014635725.1ContigBMDJ00000000SAMD00244876
CCM 8939
Pedobacter mendelii
GCA_014635565.1ContigBMDB00000000SAMD00244868
CCM 8667
Phocicoccus schoeneichii
GCA_014653055.1ScaffoldBNAA00000000SAMD00244884
CCM 8478
Pseudocitrobacter faecalis
GCA_014635625.1ContigBMDE00000000SAMD00244871
CCM 8778
Pseudomonas fluvialis
GCA_014635165.1ScaffoldBMCL00000000SAMD00244851
CCM 7430
Pseudoxanthomonas indica
GCA_014635345.1ContigBMCU00000000SAMD00244860
CCM 7905
Rhodococcus trifolii
GCA_014635585.1ScaffoldBMDC00000000SAMD00244869
CCM 8669
Rothia aerolata
GCA_014635605.1ScaffoldBMDD00000000SAMD00244870
CCM 8702
Saccharibacillus endophyticus
GCA_014636045.1ScaffoldBMDU00000000SAMD00244889
CCM 7327
Sphingobium fuliginis
GCA_014635765.1ContigBMDL00000000SAMD00244878
CCM 2734
Staphylococcus capitis
GCA_014635745.1ScaffoldBMDK00000000SAMD00244877
CCM 3387
Staphylococcus chromogenes
GCA_014635045.1ScaffoldBMCF00000000SAMD00244845
CCM 7045
Staphylococcus nepalensis
GCA_014635505.1ContigBMCY00000000SAMD00244865
CCM 8529
Staphylococcus pragensis
GCA_014635285.1ContigBMCR00000000SAMD00244857
CCM 7757
Stappia taiwanensis
GCA_014635125.1ScaffoldBMCJ00000000SAMD00244849
CCM 7282
Thalassobacillus devorans
GCA_014635305.1ContigBMCS00000000SAMD00244858
CCM 7855
Williamsia phyllosphaerae
GCA_014635865.1ContigBMDQ00000000SAMD00244883
CCM 8681
Winogradskyella haliclonae

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