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Accession: PRJNA668740 ID: 668740

Vanilla planifolia cultivar:Daphna

Vanilla planifolia alternate haplotype genome sequencing and assembly

See Genome Information for Vanilla planifolia
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This project is a component of the Vanilla planifolia genome sequencing and assembly
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12 additional projects are related by organism.
1 additional project is a component of the Vanilla planifolia genome sequencing and assembly.
This alternate haplotype of a phased, diploid reference genome for V. planifolia "Daphna" was assembled de novo from a combination of Nanopore long reads and Illumina short reads.
AccessionPRJNA668740
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismVanilla planifolia[Taxonomy ID: 51239]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla; Vanilla planifolia
SubmissionRegistration date: 22-Dec-2020
Elo Life Systems
RelevanceAgricultural
Locus Tag PrefixIMZ09
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)530
WGS master1
Protein Sequences29180
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_016413885.1ChromosomeJADCNM000000000
14
SAMN14973820
Vanilla planifolia

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