Salmonella enterica (ID 669829) - BioProject

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Accession: PRJNA669829 ID: 669829

Salmonella enterica

South Carolina Department of Health Salmonella enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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75 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.

3959 additional projects are related by organism.

Whole-genome of pure-cultured microbial pathogens as a part of GenomeTrakr

Accession	PRJNA669829
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 1-Mar-2021 South Carolina Dept. of Health & Environmental Control
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	110
SRA Experiments	112
Other datasets
BioSample	112
Assembly	110

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

110
110

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_036240235.1	ABQANJ000000000	SAMN39623741	GT24-0204	Salmonella enterica
GCA_034849455.1	ABPRHC000000000	SAMN39196284	GT24-0169	Salmonella enterica
GCA_034848595.1	ABPRGZ000000000	SAMN39196283	GT24-0161	Salmonella enterica
GCA_033649665.1	ABOVNQ000000000	SAMN35047860	GT23-0288	Salmonella enterica subsp. enterica serovar Hadar
GCA_033578155.1	ABOSZL000000000	SAMN35134424	GT23-0349	Salmonella enterica subsp. enterica serovar Muenchen
GCA_033578255.1	ABOSZO000000000	SAMN35134427	GT23-0357	Salmonella enterica subsp. enterica serovar Braenderup
GCA_033578215.1	ABOSZM000000000	SAMN35134425	GT23-0351	Salmonella enterica subsp. enterica serovar Newport
GCA_033578175.1	ABOSZN000000000	SAMN35134426	GT23-0353	Salmonella enterica subsp. enterica serovar Newport
GCA_034569215.1	ABPPAE000000000	SAMN39051577	GT24-0152	Salmonella enterica
GCA_034576255.1	ABPPME000000000	SAMN38982199	GT24-0150	Salmonella enterica
GCA_034576235.1	ABPPMF000000000	SAMN38982200	GT24-0151	Salmonella enterica
GCA_034576215.1	ABPPMD000000000	SAMN38982198	GT24-0149	Salmonella enterica
GCA_034576195.1	ABPPMB000000000	SAMN38982196	GT24-0146	Salmonella enterica
GCA_034576175.1	ABPPMC000000000	SAMN38982197	GT24-0147	Salmonella enterica
GCA_032268845.1	ABNFDM000000000	SAMN34405861	GT23-0236	Salmonella enterica subsp. enterica serovar Newport
GCA_033504475.1	ABOSFJ000000000	SAMN35215635	GT23-0343	Salmonella enterica subsp. enterica serovar Braenderup
GCA_032861535.1	ABOCSM000000000	SAMN35642771	GT23-0393	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_032861505.1	ABOCSL000000000	SAMN35642772	GT23-0403	Salmonella enterica subsp. enterica serovar Braenderup
GCA_032861485.1	ABOCSJ000000000	SAMN35642773	GT23-0405	Salmonella enterica subsp. enterica serovar Montevideo
GCA_032977165.1	ABOGUJ000000000	SAMN35642770	GT23-0389	Salmonella enterica subsp. enterica serovar Cannstatt
GCA_032975225.1	ABOGQV000000000	SAMN35664310	GT23-0412	Salmonella enterica subsp. enterica serovar Javiana
GCA_019830375.1	ABCFRV000000000	SAMN20170118	PNUSAS211533	Salmonella enterica
GCA_019830355.1	ABCFRU000000000	SAMN20170129	PNUSAS211520	Salmonella enterica
GCA_022050305.1	ABFAHW000000000	SAMN19486358	C161948-S	Salmonella enterica
GCA_019237665.1	ABBHWP000000000	SAMN20176954	PNUSAS211525	Salmonella enterica
GCA_019239675.1	ABBHXV000000000	SAMN20170114	PNUSAS211529	Salmonella enterica
GCA_019209445.1	ABBGVM000000000	SAMN20170124	PNUSAS211524	Salmonella enterica
GCA_019205505.1	ABBGQD000000000	SAMN20170120	C165648-S	Salmonella enterica
GCA_019255805.1	ABBIJG000000000	SAMN20170115	PNUSAS211526	Salmonella enterica
GCA_019256825.1	ABBILK000000000	SAMN20170116	PNUSAS211523	Salmonella enterica
GCA_019256805.1	ABBILL000000000	SAMN20170111	PNUSAS211535	Salmonella enterica
GCA_019256965.1	ABBILJ000000000	SAMN20170117	PNUSAS211532	Salmonella enterica
GCA_019256325.1	ABBIKE000000000	SAMN20170121	PNUSAS211531	Salmonella enterica
GCA_019256305.1	ABBIKF000000000	SAMN20170113	PNUSAS211528	Salmonella enterica
GCA_019256285.1	ABBIKC000000000	SAMN20170128	PNUSAS211519	Salmonella enterica
GCA_019257505.1	ABBIMK000000000	SAMN20170112	PNUSAS211530	Salmonella enterica
GCA_019256905.1	ABBILI000000000	SAMN20170132	PNUSAS211534	Salmonella enterica
GCA_019252975.1	ABBIEE000000000	SAMN20170131	PNUSAS211521	Salmonella enterica
GCA_019252945.1	ABBIDZ000000000	SAMN20170130	PNUSAS211522	Salmonella enterica
GCA_019252455.1	ABBIDH000000000	SAMN20170122	PNUSAS211527	Salmonella enterica
GCA_018477505.1	ABAOFM000000000	SAMN19102606	PNUSAS200893	Salmonella enterica
GCA_018477465.1	ABAOEY000000000	SAMN19102608	PNUSAS200881	Salmonella enterica
GCA_018477485.1	ABAOEZ000000000	SAMN19102609	PNUSAS200887	Salmonella enterica
GCA_018477445.1	ABAOGL000000000	SAMN19102605	PNUSAS200890	Salmonella enterica
GCA_018477545.1	ABAOEX000000000	SAMN19102607	PNUSAS200882	Salmonella enterica
GCA_018169395.1	ABAGCM000000000	SAMN18863741	PNUSAS198921	Salmonella enterica
GCA_018169315.1	ABAGCK000000000	SAMN18863740	PNUSAS198922	Salmonella enterica
GCA_018169235.1	ABAGCJ000000000	SAMN18863739	PNUSAS198916	Salmonella enterica
GCA_018169195.1	ABAGCE000000000	SAMN18863738	PNUSAS198915	Salmonella enterica
GCA_018185775.1	ABAGVW000000000	SAMN18872221	PNUSAS199160	Salmonella enterica
GCA_017482265.1	AAZNUD000000000	SAMN18340498	PNUSAS194881	Salmonella enterica
GCA_017482075.1	AAZNUC000000000	SAMN18340499	PNUSAS194884	Salmonella enterica
GCA_017339655.1	AAZLUE000000000	SAMN18204975	PNUSAS194138	Salmonella enterica
GCA_017339635.1	AAZLUF000000000	SAMN18204979	PNUSAS194127	Salmonella enterica
GCA_017339615.1	AAZLUK000000000	SAMN18205024	PNUSAS194137	Salmonella enterica
GCA_017111205.1	AAZCDY000000000	SAMN18062713	PNUSAS193215	Salmonella enterica
GCA_017111065.1	AAZCDX000000000	SAMN18062714	PNUSAS193212	Salmonella enterica
GCA_017083185.1	AAZBJB000000000	SAMN18090132	PNUSAS193309	Salmonella enterica
GCA_017083165.1	AAZBIJ000000000	SAMN18090131	PNUSAS193312	Salmonella enterica
GCA_036629435.1	ABQGTM000000000	SAMN39945319	GT24-0253	Salmonella enterica
GCA_036487585.1	ABQFHD000000000	SAMN39890281	GT24-0245	Salmonella enterica
GCA_036449885.1	ABQDEP000000000	SAMN39856641	GT24-0242	Salmonella enterica
GCA_037099415.1	ABQQBP000000000	SAMN40333677	GT24-0286	Salmonella enterica
GCA_037099395.1	ABQQBR000000000	SAMN40333679	GT24-0298	Salmonella enterica
GCA_037078015.1	ABQPUV000000000	SAMN40333678	GT24-0291	Salmonella enterica
GCA_037552385.1	ABRAPN000000000	SAMN40333676	GT24-0278	Salmonella enterica
GCA_037982035.1	ABROXJ000000000	SAMN40761542	GT24-0303	Salmonella enterica
GCA_037961745.1	ABRNXK000000000	SAMN40738808	GT24-0328	Salmonella enterica
GCA_037961685.1	ABRNXI000000000	SAMN40738807	GT24-0326	Salmonella enterica
GCA_038488145.1	ABRXAM000000000	SAMN41081932	GT24-0351	Salmonella enterica
GCA_038488445.1	ABRXBC000000000	SAMN41081930	GT24-0338	Salmonella enterica
GCA_038487825.1	ABRWZR000000000	SAMN41081931	GT24-0346	Salmonella enterica
GCA_038488785.1	ABRXBQ000000000	SAMN41081933	GT24-0360	Salmonella enterica
GCA_039806325.1	ABSLEK000000000	SAMN41523408	GT24-0375	Salmonella enterica
GCA_039806565.1	ABSLET000000000	SAMN41523405	GT24-0372	Salmonella enterica
GCA_039806545.1	ABSLES000000000	SAMN41523396	GT24-0362	Salmonella enterica
GCA_039806525.1	ABSLEP000000000	SAMN41523404	GT24-0371	Salmonella enterica
GCA_039806505.1	ABSLER000000000	SAMN41523395	GT24-0361	Salmonella enterica
GCA_039806485.1	ABSLEQ000000000	SAMN41523399	GT24-0365	Salmonella enterica
GCA_039806465.1	ABSLEM000000000	SAMN41523403	GT24-0370	Salmonella enterica
GCA_039806445.1	ABSLEN000000000	SAMN41523413	GT24-0382	Salmonella enterica
GCA_039806425.1	ABSLEO000000000	SAMN41523397	GT24-0363	Salmonella enterica
GCA_039806405.1	ABSLEL000000000	SAMN41523412	GT24-0379	Salmonella enterica
GCA_039806385.1	ABSLEI000000000	SAMN41523409	GT24-0376	Salmonella enterica
GCA_039806365.1	ABSLEJ000000000	SAMN41523411	GT24-0378	Salmonella enterica
GCA_039808265.1	ABSLFJ000000000	SAMN41523401	GT24-0368	Salmonella enterica
GCA_039808185.1	ABSLFG000000000	SAMN41523407	GT24-0374	Salmonella enterica
GCA_039808155.1	ABSLFH000000000	SAMN41523398	GT24-0364	Salmonella enterica
GCA_039808145.1	ABSLFI000000000	SAMN41523410	GT24-0377	Salmonella enterica
GCA_039811105.1	ABSLFQ000000000	SAMN41523406	GT24-0373	Salmonella enterica
GCA_039806785.1	ABSLFC000000000	SAMN41523400	GT24-0366	Salmonella enterica
GCA_039806765.1	ABSLFD000000000	SAMN41523402	GT24-0369	Salmonella enterica
GCA_040181165.1	ABSYLP000000000	SAMN41820313	GT24-0384	Salmonella enterica
GCA_040181105.1	ABSYLQ000000000	SAMN41820312	GT24-0381	Salmonella enterica
GCA_040177205.1	ABSYEC000000000	SAMN41820314	GT24-0385	Salmonella enterica
GCA_040177165.1	ABSYEB000000000	SAMN41820311	GT24-0380	Salmonella enterica
GCA_040253405.1	ABTAID000000000	SAMN41914958	GT24-0413	Salmonella enterica
GCA_040253365.1	ABTAIC000000000	SAMN41914954	GT24-0387	Salmonella enterica
GCA_040253235.1	ABTAIB000000000	SAMN41914955	GT24-0390	Salmonella enterica
GCA_040253885.1	ABTAIF000000000	SAMN41914953	GT24-0386	Salmonella enterica
GCA_040253835.1	ABTAIG000000000	SAMN41914956	GT24-0394	Salmonella enterica
GCA_040253825.1	ABTAIH000000000	SAMN41914957	GT24-0400	Salmonella enterica
GCA_041529305.1	ABUIOF000000000	SAMN43385648	GT25-0023	Salmonella enterica
GCA_041527625.1	ABUIKZ000000000	SAMN43385646	GT25-0006	Salmonella enterica
GCA_041527645.1	ABUILA000000000	SAMN43385647	GT25-0018	Salmonella enterica
GCA_041732215.1	ABUKKX000000000	SAMN43486945	GT25-0037	Salmonella enterica
GCA_041788405.1	ABUMIV000000000	SAMN43486948	GT25-0062	Salmonella enterica
GCA_041788205.1	ABUMIT000000000	SAMN43486946	GT25-0049	Salmonella enterica
GCA_041788245.1	ABUMIU000000000	SAMN43486947	GT25-0056	Salmonella enterica
GCA_042345515.1	ABVFGX000000000	SAMN43945621	GT25-0079	Salmonella enterica

SRA Data Details

Parameter	Value
Data volume, Gbases	45
Data volume, Mbytes	24636

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Salmonella enterica

South Carolina Department of Health Salmonella enterica Genome sequencing and assembly

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