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Accession: PRJNA674393 ID: 674393

Myotis myotis Umbrella project

See Genome Information for Myotis myotis
The greater mouse-eared bat (Myotis myotis) is a European species of bat in the family Vespertilionidae. This assembly has been produced as part of the Bat1K Project. DNA was collected from a female, wild caught in Limerzel, France by Emma Teeling and Sebastien Puechemaille. The samples were prepared in the Long Read team of the DRESDEN concept Genome Center, and sequencing was conducted at DRESDEN concept Genome Center, MPI for Evolutionary Biology, and Phase Genomics. Genome assembly, annotation and manual curation of chromosomes was conducted by the Bat1K group, and in particular by Martin Pippel of Gene Myers lab and David Jebb of Michael Hiller's lab at MPI-CBG. The primary haplotype contains the longest contigs of the DAmar assembly, phased with 10X linked reads, scaffolded with Bionano optical maps, and Phase Genomics HiC reads. More...
AccessionPRJNA674393
TypeUmbrella project
OrganismMyotis myotis[Taxonomy ID: 51298]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis; Myotis myotis
Grants
  • "Teeling" (Grant ID 204844/Z/16/Z, SFI-HRB-Wellcome Biomedical Research Partnership)
  • "Interdisciplinary Graduate Training to Understand and Inform Decision Processes Using Advanced Spatial Data Analysis and Visualization" (Grant ID 1633299, National Science Foundation Division of Graduate Education)
  • "Discovering genomic and developmental mechanisms that underlie sensory innovations critical to adaptive diversification" (Grant ID 1442142, National Science Foundation Division of Environmental Biology)
  • "Genomics of exceptions to scaling of longevity to body size" (Grant ID 1838273, National Science Foundation Division of Environmental Biology)
  • "Genomics of exceptions to scaling of longevity to body size" (Grant ID 1838273, National Science Foundation Division of Environmental Biology)
  • "Myers, Hiller, Pippel, Vernes, Devanna, Lavrichenko" (Grant ID Myers, Max Planck Society)
  • "The first mammalian model for vocal learning: a molecular, neural and comparative approach in bats" (Grant ID RGP0058/2016, Human Frontiers Science Program Research grant)
  • "Hiller" (Grant ID HI 1423/3-1, German Research Foundation)
  • "Pippel" (Grant ID 01IS18026C, German Federal Ministry of Education and Research)
  • "Teeling" (Grant ID ERC-2012-StG311000, European Research Council Research Grant)
SubmissionRegistration date: 3-Nov-2020
Bat1K
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)71089
WGS master1
Transcript70917
SRA Experiments9
Protein Sequences107200
Publications
PubMed2
PMC1
Other datasets
BioSample4
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases309
Data volume, Mbytes99993
This project encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds

2
BioProject
accession
Assembly
level
OrganismTitle
PRJNA628559 ScaffoldsMyotis myotisMyotis myotis isolate:mMyoMyo1 Genome sequencing and assembly (Bat1K)
PRJNA665501 ScaffoldsMyotis myotisMyotis myotis isolate:mMyoMyo1 RefSeq Genome sequencing and assembly (NCBI)

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