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Accession: PRJNA675595 ID: 675595

Salmonella enterica

GenomeTrakr Project: VT Dept. of Health, Salmonella enterica

See Genome Information for Salmonella enterica
Whole genome sequencing of pure-cultured microbial pathogens as part of the GenomeTrakr surveillance effort.
AccessionPRJNA675595
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica[Taxonomy ID: 28901]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
SubmissionRegistration date: 27-Aug-2021
Vermont Department of Health Laboratory
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)130
SRA Experiments142
Other datasets
BioSample142
Assembly130
Assembly details:
Assembly levelNumber of Assemblies
130
130
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_035657515.1ContigABPVMJ000000000SAMN39419012
PNUSAS414225
GCA_035657435.1ContigABPVMH000000000SAMN39419011
PNUSAS414227
GCA_035657415.1ContigABPVMI000000000SAMN39419010
PNUSAS414226
GCA_035896675.1ContigABPXKB000000000SAMN39419013
PNUSAS414224
GCA_035896535.1ContigABPXJY000000000SAMN39419009
PNUSAS414228
GCA_035896755.1ContigABPXKF000000000SAMN39419008
PNUSAS414229
GCA_035924685.1ContigABPXZQ000000000SAMN39506170
PNUSAS415626
GCA_035924665.1ContigABPXZP000000000SAMN39506168
PNUSAS415625
GCA_035924625.1ContigABPXZN000000000SAMN39506169
PNUSAS415627
GCA_035924585.1ContigABPXZK000000000SAMN39506167
PNUSAS415624
GCA_035123195.1ContigABPSNK000000000SAMN39255879
PNUSAS412420
GCA_035123155.1ContigABPSNL000000000SAMN39255878
PNUSAS412421
GCA_035123135.1ContigABPSNJ000000000SAMN39255882
PNUSAS412417
GCA_033786005.1ContigABPARL000000000SAMN38283019
PNUSAS401624
GCA_033785685.1ContigABPAQU000000000SAMN38283020
PNUSAS401621
GCA_033785665.1ContigABPAQX000000000SAMN38283018
PNUSAS401623
GCA_033785565.1ContigABPAQR000000000SAMN38283021
PNUSAS401622
GCA_034557875.1ContigABPOGZ000000000SAMN39093439
PNUSAS410795
GCA_034557815.1ContigABPOGX000000000SAMN39093438
PNUSAS410796
GCA_034557795.1ContigABPOGV000000000SAMN39093436
PNUSAS410797
GCA_034557775.1ContigABPOGQ000000000SAMN39093437
PNUSAS410794
GCA_031443285.1ContigABMGOK000000000SAMN36093236
PNUSAS359913
GCA_031443245.1ContigABMGOI000000000SAMN36093239
PNUSAS359910
GCA_031443225.1ContigABMGOH000000000SAMN36093241
PNUSAS359911
GCA_031443205.1ContigABMGOG000000000SAMN36093237
PNUSAS359914
GCA_031443165.1ContigABMGOF000000000SAMN36093240
PNUSAS359915
GCA_031443145.1ContigABMGOE000000000SAMN36093242
PNUSAS359917
GCA_031443185.1ContigABMGOD000000000SAMN36093238
PNUSAS359916
GCA_031443125.1ContigABMGOC000000000SAMN36093243
PNUSAS359912
GCA_032752355.1ContigABNXCU000000000SAMN35878136
PNUSAS358135
GCA_032752335.1ContigABNXCR000000000SAMN35878137
PNUSAS358136
GCA_032751655.1ContigABNXBL000000000SAMN35879554
PNUSAS358137
GCA_032967285.1ContigABOGFX000000000SAMN35677677
PNUSAS354717
GCA_032967245.1ContigABOGGA000000000SAMN35677679
PNUSAS354719
GCA_032967225.1ContigABOGFY000000000SAMN35677675
PNUSAS354720
GCA_032967205.1ContigABOGFW000000000SAMN35677678
PNUSAS354718
GCA_032812515.1ContigABOANF000000000SAMN35774777
PNUSAS356557
GCA_032812495.1ContigABOANH000000000SAMN35774791
PNUSAS356555
GCA_032812465.1ContigABOANE000000000SAMN35774778
PNUSAS356554
GCA_032812445.1ContigABOANI000000000SAMN35774790
PNUSAS356556
GCA_033058995.1ContigABOJZC000000000SAMN35361952
PNUSAS351189
GCA_033059195.1ContigABOJZL000000000SAMN35361951
PNUSAS351190
GCA_019789135.1ContigABCDQG000000000SAMN21020233
PNUSAS223628
GCA_020039345.1ContigABCNWZ000000000SAMN21206979
PNUSAS214827
GCA_020039325.1ContigABCNWU000000000SAMN21021590
PNUSAS214815
GCA_020039405.1ContigABCNWY000000000SAMN21206984
PNUSAS214826
GCA_020039425.1ContigABCNWX000000000SAMN21021589
PNUSAS214816
GCA_020039385.1ContigABCNXC000000000SAMN21206985
PNUSAS214828
GCA_020039365.1ContigABCNWW000000000SAMN21021587
PNUSAS214825
GCA_020039445.1ContigABCNXB000000000SAMN21021586
PNUSAS214829
GCA_020039565.1ContigABCNXH000000000SAMN21206977
PNUSAS214819
GCA_020039545.1ContigABCNXG000000000SAMN21206976
PNUSAS214818
GCA_020039525.1ContigABCNXD000000000SAMN21021588
PNUSAS214817
GCA_020039505.1ContigABCNXF000000000SAMN21021583
PNUSAS214832
GCA_020039485.1ContigABCNXA000000000SAMN21021585
PNUSAS214830
GCA_020039465.1ContigABCNXE000000000SAMN21021584
PNUSAS214831
GCA_020039705.1ContigABCNXI000000000SAMN21206978
PNUSAS214820
GCA_020039685.1ContigABCNXJ000000000SAMN21206980
PNUSAS214821
GCA_020039665.1ContigABCNXK000000000SAMN21206982
PNUSAS214822
GCA_020039625.1ContigABCNXL000000000SAMN21206981
PNUSAS214823
GCA_020039605.1ContigABCNXM000000000SAMN21206983
PNUSAS214824
GCA_036941555.1ContigABQMLY000000000SAMN40216535
PNUSAS423439
GCA_036941745.1ContigABQMMH000000000SAMN40216537
PNUSAS423441
GCA_036941515.1ContigABQMLX000000000SAMN40216534
PNUSAS423442
GCA_036941195.1ContigABQMLH000000000SAMN40216536
PNUSAS423440
GCA_036884575.1ContigABQKHR000000000SAMN39831283
PNUSAS418727
GCA_036415915.1ContigABQCKA000000000SAMN39831286
PNUSAS418730
GCA_036415875.1ContigABQCJY000000000SAMN39831285
PNUSAS418731
GCA_036410735.1ContigABQCAB000000000SAMN39831284
PNUSAS418729
GCA_036410655.1ContigABQBZW000000000SAMN39831287
PNUSAS418728
GCA_036408275.1ContigABQBXL000000000SAMN39831288
PNUSAS418726
GCA_036449555.1ContigABQDED000000000SAMN39857826
PNUSAS419685
GCA_036449635.1ContigABQDEC000000000SAMN39857820
PNUSAS419689
GCA_036449615.1ContigABQDEG000000000SAMN39857822
PNUSAS419691
GCA_036449565.1ContigABQDEE000000000SAMN39857823
PNUSAS419688
GCA_036449315.1ContigABQDDQ000000000SAMN39857824
PNUSAS419690
GCA_036449295.1ContigABQDDO000000000SAMN39857825
PNUSAS419686
GCA_036449275.1ContigABQDDN000000000SAMN39857821
PNUSAS419687
GCA_037078095.1ContigABQPUW000000000SAMN40333512
PNUSAS424558
GCA_037077515.1ContigABQPTP000000000SAMN40333513
PNUSAS424557
GCA_037254775.1ContigABQSRW000000000SAMN40527025
PNUSAS426243
GCA_037255005.1ContigABQSSB000000000SAMN40527026
PNUSAS426244
GCA_037254975.1ContigABQSRY000000000SAMN40527015
PNUSAS426246
GCA_037255075.1ContigABQSSD000000000SAMN40527024
PNUSAS426245
GCA_037492565.1ContigABQWQP000000000SAMN40579920
PNUSAS427257
GCA_037492645.1ContigABQWQS000000000SAMN40578793
PNUSAS427258
GCA_037492625.1ContigABQWQT000000000SAMN40578792
PNUSAS427260
GCA_037492605.1ContigABQWQQ000000000SAMN40578791
PNUSAS427259
GCA_037570005.1ContigABRAZE000000000SAMN39904144
PNUSAS419935
GCA_037569075.1ContigABRAXK000000000SAMN39904143
PNUSAS419936
GCA_037569015.1ContigABRAXH000000000SAMN39904145
PNUSAS419934
GCA_037965825.1ContigABRODJ000000000SAMN40751514
PNUSAS429359
GCA_037978255.1ContigABROQH000000000SAMN40760043
PNUSAS429514
GCA_037978495.1ContigABROQG000000000SAMN40760044
PNUSAS429515
GCA_037965845.1ContigABRODK000000000SAMN40751515
PNUSAS429360
GCA_037632945.1ContigABRBIA000000000SAMN40617392
PNUSAS427824
GCA_037686165.1ContigABRCZO000000000SAMN40621489
PNUSAS428000
GCA_037667135.1ContigABRBXK000000000SAMN40621488
PNUSAS427996
GCA_037663775.1ContigABRBUD000000000SAMN40621487
PNUSAS427999
GCA_037663675.1ContigABRBUE000000000SAMN40621491
PNUSAS427998
GCA_037663695.1ContigABRBUC000000000SAMN40621490
PNUSAS427997
GCA_038298575.1ContigABRTJO000000000SAMN40982932
PNUSAS431564
GCA_038299175.1ContigABRTJX000000000SAMN40982934
PNUSAS431561
GCA_038299155.1ContigABRTJY000000000SAMN40982931
PNUSAS431562
GCA_038109825.1ContigABRSAR000000000SAMN40946909
PNUSAS431056
GCA_038391815.1ContigABRUGB000000000SAMN40982933
PNUSAS431563
GCA_039710555.1ContigABSHUW000000000SAMN41462625
PNUSAS438718
GCA_039709775.1ContigABSHTR000000000SAMN41462628
PNUSAS438719
GCA_039709755.1ContigABSHTT000000000SAMN41462626
PNUSAS438717
GCA_039709735.1ContigABSHTV000000000SAMN41462627
PNUSAS438716
GCA_039709815.1ContigABSHTS000000000SAMN41462624
PNUSAS438715
GCA_039602635.1ContigABSDDR000000000SAMN41323754
PNUSAS435360
GCA_039602595.1ContigABSDDP000000000SAMN41323755
PNUSAS435358
GCA_039602545.1ContigABSDDQ000000000SAMN41323753
PNUSAS435361
GCA_039602535.1ContigABSDDN000000000SAMN41323880
PNUSAS435359
GCA_039814045.1ContigABSLHS000000000SAMN41526244
PNUSAS439750
GCA_039813385.1ContigABSLGN000000000SAMN41526248
PNUSAS439747
GCA_039813365.1ContigABSLGO000000000SAMN41526245
PNUSAS439749
GCA_039813685.1ContigABSLHC000000000SAMN41526247
PNUSAS439748
GCA_039813605.1ContigABSLGW000000000SAMN41526246
PNUSAS439746
GCA_041275985.1ContigABUAXG000000000SAMN43145348
PNUSAS461583
GCA_041276165.1ContigABUAXO000000000SAMN43145347
PNUSAS461584
GCA_041352155.1ContigABUDUQ000000000SAMN43257677
PNUSAS464154
GCA_041732075.1ContigABUKKP000000000SAMN43484576
PNUSAS470061
GCA_041732035.1ContigABUKKO000000000SAMN43484632
PNUSAS470058
GCA_041770035.1ContigABULSU000000000SAMN43483508
PNUSAS470060
GCA_041794235.1ContigABUMLX000000000SAMN43484287
PNUSAS470059
GCA_042230015.1ContigABUZKF000000000SAMN43588832
PNUSAS473159
GCA_042229985.1ContigABUZKD000000000SAMN43588844
PNUSAS473158
GCA_042229905.1ContigABUZKE000000000SAMN43588843
PNUSAS473160
SRA Data Details
ParameterValue
Data volume, Gbases43
Data volume, Mbytes24815

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