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Accession: PRJNA694014 ID: 694014

Severe acute respiratory syndrome coronavirus 2 strain:SARS-CoV-2

Virus sequencing of the 501Y.V2 variant of SARS-CoV-2 by the Network for Genomics Surveillance in South-Africa (NGS-SA)

See Genome Information for Severe acute respiratory syndrome-related coronavirus
Collection of raw sequence reads from whole-genome sequencing of SARS-CoV-2 viral samples belonging to the new 501Y.V2 variant in South-Africa, first detected in Oct/November 2020 during COVID-19 pandemic
AccessionPRJNA694014
Data TypeRaw sequence reads, Genome sequencing
ScopeMultiisolate
OrganismSevere acute respiratory syndrome coronavirus 2[Taxonomy ID: 2697049]
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus 2
Publications
  • Published online: Tegally H et al., "Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa", name, 2020;
SubmissionRegistration date: 22-Jan-2021
Network for Genomic Surveillance in South Africa (NGS-SA)
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments400
Other datasets
BioSample400
SRA Data Details
ParameterValue
Data volume, Gbases51
Data volume, Mbytes32851

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