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Accession: PRJDB10420 ID: 695463

Solanum

Genome seqeunces of tomato wild ancestors

Genome sequence analysis of genomes of tomato wild ancestors, Solanum lycopersicum var cerasiforme and S. pimpinellifolium
AccessionPRJDB10420
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSolanum[Taxonomy ID: 4107]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
PublicationsTakei H et al., "De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and SolanumĀ  lycopersicum var. cerasiforme, by long-read sequencing.", DNA Res, 2021 Jan 19;28(1)
SubmissionRegistration date: 27-Jan-2021
Kazusa DNA Research Institute
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10
WGS master2
Genomic DNA8
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases649
Data volume, Tbytes0.20

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