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Accession: PRJNA699398 ID: 699398

Severe acute respiratory syndrome coronavirus 2

Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers

See Genome Information for Severe acute respiratory syndrome-related coronavirus
LeTRS, a bioinformatics tool, was developed to identify viral subgenomic mRNAs using Illumina and Nanopore sequencing data.
AccessionPRJNA699398
Data TypeRaw sequence reads
ScopeMonoisolate
OrganismSevere acute respiratory syndrome coronavirus 2[Taxonomy ID: 2697049]
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus 2
Publications
  • Published online: Dong X et al., "Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers", GigaScience, 2022;11
SubmissionRegistration date: 4-Feb-2021
University of Liverpool
Locus Tag PrefixJQ867
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments86
Other datasets
BioSample86
SRA Data Details
ParameterValue
Data volume, Gbases3,208
Data volume, Tbytes1.10

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