ID 716287 - BioProject

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Accession: PRJNA716287 ID: 716287

Lignocellulose-decomposing bacterial consortium

A bacterial consortia that can deconstruct lignocellulosic biomass

Accession	PRJNA716287
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Weiss B et al., "Unraveling a Lignocellulose-Decomposing Bacterial Consortium from Soil Associated with Dry Sugarcane Straw by Genomic-Centered Metagenomics.", Microorganisms, 2021 May 5;9(5) Constancio MTL et al., "Exploring the Potential of Two Bacterial Consortia to Degrade Cellulosic Biomass for Biotechnological Applications.", Curr Microbiol, 2020 Oct;77(10):3114-3124
Grants	"Deconstruction of lignocellulosic material by bacterial consortium" (Grant ID 16/16624-1, The São Paulo Research Foundation)
Submission	Registration date: 22-Mar-2021 UNESP-FCAV
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	52
SRA Experiments	4
Publications
PubMed	2
PMC	1
Other datasets
BioSample	53
Assembly	52

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

44
8
52

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_017744975.1	JAGIAE000000000	SAMN18417676	BIN14	Acidovorax sp.
GCA_017744475.1	JAGIBM000000000	SAMN18417710	BIN48	Acinetobacter oleivorans
GCA_017744915.1	JAGIAH000000000	SAMN18417679	BIN17	Agrobacterium tumefaciens
GCA_017745255.1	JAGHZT000000000	SAMN18417665	BIN3	Arthrobacter sp.
GCA_017745015.1	JAGIAF000000000	SAMN18417677	BIN15	Bdellovibrio sp.
GCA_017744445.1	JAGIBH000000000	SAMN18417705	BIN43	Caulobacter sp.
GCA_017744495.1	JAGIBE000000000	SAMN18417702	BIN40	Caulobacter sp.
GCA_017745235.1	JAGHZU000000000	SAMN18417666	BIN4	Caulobacter sp.
GCA_017744535.1	JAGIBB000000000	SAMN18417699	BIN37	Cellulomonas iranensis
GCA_017744555.1	JAGIBD000000000	SAMN18417701	BIN39	Cellulomonas sp.
GCA_017745275.1	JAGHZS000000000	SAMN18417664	BIN2	Chitinophaga sp.
GCA_017744575.1	JAGIBC000000000	SAMN18417700	BIN38	Chitinophagaceae bacterium
GCA_017745025.1	JAGIAJ000000000	SAMN18417681	BIN19	Chitinophagaceae bacterium
GCA_017744805.1	JAGIAP000000000	SAMN18417687	BIN25	Chitinophagaceae bacterium
GCA_017745155.1	JAGHZX000000000	SAMN18417669	BIN7	Chryseobacterium sp.
GCA_017744595.1	JAGIBA000000000	SAMN18417698	BIN36	Cohnella sp.
GCA_017744655.1	JAGIAW000000000	SAMN18417694	BIN32	Devosia sp.
GCA_017744955.1	JAGIAG000000000	SAMN18417678	BIN16	Dokdonella sp.
GCA_017744695.1	JAGIAS000000000	SAMN18417690	BIN28	Dyadobacter sp.
GCA_017745135.1	JAGIAB000000000	SAMN18417673	BIN11	Flavisolibacter sp.
GCA_017744675.1	JAGIAV000000000	SAMN18417693	BIN31	Flavobacterium sp.
GCA_017744395.1	JAGIBI000000000	SAMN18417706	BIN44	Herbaspirillum sp.
GCA_017744755.1	JAGIAU000000000	SAMN18417692	BIN30	Microbacteriaceae bacterium
GCA_017744855.1	JAGIAK000000000	SAMN18417682	BIN20	Microbacterium sp.
GCA_017744795.1	JAGIAQ000000000	SAMN18417688	BIN26	Niabella sp.
GCA_017744715.1	JAGIAT000000000	SAMN18417691	BIN29	Niabella sp.
GCA_017744515.1	JAGIBF000000000	SAMN18417703	BIN41	Niastella sp.
GCA_017744365.1	JAGIBL000000000	SAMN18417709	BIN47	Nocardioidaceae bacterium
GCA_017744735.1	JAGIAR000000000	SAMN18417689	BIN27	Novosphingobium sp.
GCA_017745295.1	JAGHZR000000000	SAMN18417663	BIN1	Novosphingobium sp.
GCA_017744275.1	JAGIBQ000000000	SAMN18417714	BIN52	Novosphingobium sp.
GCA_017744765.1	JAGIAX000000000	SAMN18417695	BIN33	Paenibacillaceae bacterium
GCA_017744315.1	JAGIBN000000000	SAMN18417711	BIN49	Porphyrobacter sp.
GCA_017744875.1	JAGIAO000000000	SAMN18417686	BIN24	Pseudacidovorax sp.
GCA_017744435.1	JAGIBG000000000	SAMN18417704	BIN42	Pseudomonas sp.
GCA_017745195.1	JAGHZW000000000	SAMN18417668	BIN6	Pseudoxanthomonas sp.
GCA_017745055.1	JAGIAC000000000	SAMN18417674	BIN12	Roseateles chitosanitabidus
GCA_017744895.1	JAGIAL000000000	SAMN18417683	BIN21	Shinella sp.
GCA_017744995.1	JAGIAN000000000	SAMN18417685	BIN23	Siphonobacter aquaeclarae
GCA_017744415.1	JAGIBJ000000000	SAMN18417707	BIN45	Solirubrobacteraceae bacterium
GCA_017745075.1	JAGIAD000000000	SAMN18417675	BIN13	Sphingobacteriaceae bacterium
GCA_017745115.1	JAGIAA000000000	SAMN18417672	BIN10	Sphingobium sp.
GCA_017744635.1	JAGIAY000000000	SAMN18417696	BIN34	Sphingobium sp.
GCA_017744605.1	JAGIAZ000000000	SAMN18417697	BIN35	Sphingobium sp.
GCA_017744335.1	JAGIBO000000000	SAMN18417712	BIN50	Sphingobium yanoikuyae
GCA_017744835.1	JAGIAM000000000	SAMN18417684	BIN22	Sphingomonas sp.
GCA_017745215.1	JAGHZV000000000	SAMN18417667	BIN5	Sphingomonas sp.
GCA_017745175.1	JAGHZY000000000	SAMN18417670	BIN8	Sphingopyxis sp.
GCA_017745095.1	JAGHZZ000000000	SAMN18417671	BIN9	Sporocytophaga sp.
GCA_017744285.1	JAGIBP000000000	SAMN18417713	BIN51	Variovorax sp.
GCA_017744935.1	JAGIAI000000000	SAMN18417680	BIN18	Variovorax sp.
GCA_017744355.1	JAGIBK000000000	SAMN18417708	BIN46	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	30
Data volume, Mbytes	11588

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