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Accession: PRJNA720102 ID: 720102

Cryptococcus neoformans var. neoformans strain:XL280alpha

Cryptococcus deneoformans XL280 alpha genome sequencing and assembly

See Genome Information for Cryptococcus neoformans
C. deneoformans XL280 alpha genome sequencing was performed using nanopore sequencing. The resulting genome assembly consisting of 14 chromosomes was polished using Illumina data.
AccessionPRJNA720102
Data TypeGenome sequencing and assembly, Raw sequence reads, Assembly
ScopeMonoisolate
OrganismCryptococcus neoformans var. neoformans[Taxonomy ID: 40410]
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans
PublicationsFu C et al., "Dynamic genome plasticity during unisexual reproduction in the human fungal pathogen Cryptococcus deneoformans.", PLoS Genet, 2021 Nov;17(11):e1009935
SubmissionRegistration date: 6-Apr-2021
Duke University
RelevanceModel Organism
Locus Tag PrefixJ9251
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)14
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases11
Data volume, Mbytes10169

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