ID 745182 - BioProject

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Accession: PRJNA745182 ID: 745182

Epidemiology of Salmonella and E. coli in wildlife and environmental samples from swine farms in Ontario

Salmonella and phenotypically resistant E. coli isolates collected from raccoons, soil, and swine manure pits on farms in southern Ontario were assessed to better understand the contribution of wildlife to the dissemination of Salmonella and antimicrobial resistance in the ecosystem.

Accession	PRJNA745182
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Vogt NA et al., "Using whole-genome sequence data to examine the epidemiology of Salmonella, Escherichia coli and associated antimicrobial resistance in raccoons (Procyon lotor), swine manure pits, and soil samples on swine farms in southern Ontario, Canada.", PLoS One, 2021;16(11):e0260234
Grants	"Using whole genome sequencing to understand the ecology of Salmonella and antimicrobial resistance at the human, wildlife, environmental, and livestock interface" (Grant ID UofG2016-2642, Ontario Ministry of Agriculture, Food, and Rural Affairs)
Submission	Registration date: 9-Jul-2021 University of Guelph
Relevance	One Health, zoonoses

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	255
Publications
PubMed	1
PMC	1
Other datasets
BioSample	255
Assembly	255

Assembly details:

Download

Assembly level

Number of Assemblies

Scaffold

Contig

Total

15
240
255

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_020676055.1	JAIHIW000000000	SAMN20150273	S576	Escherichia coli
GCA_020668675.1	JAIHKP000000000	SAMN20150318	6251	Escherichia coli
GCA_020668645.1	JAIHKQ000000000	SAMN20150319	41277	Escherichia coli
GCA_020668625.1	JAIHKS000000000	SAMN20150321	13-27-3	Escherichia coli
GCA_020668615.1	JAIHKT000000000	SAMN20150322	6304	Escherichia coli
GCA_020668595.1	JAIHKR000000000	SAMN20150320	41336	Escherichia coli
GCA_020668575.1	JAIHKU000000000	SAMN20150323	41337	Escherichia coli
GCA_020668525.1	JAIHKX000000000	SAMN20150326	6401	Escherichia coli
GCA_020668505.1	JAIHKW000000000	SAMN20150325	41309	Escherichia coli
GCA_020668495.1	JAIHKV000000000	SAMN20150324	6351	Escherichia coli
GCA_020668485.1	JAIHKY000000000	SAMN20150327	6402	Escherichia coli
GCA_020668475.1	JAIHKZ000000000	SAMN20150328	6407	Escherichia coli
GCA_020668455.1	JAIHLB000000000	SAMN20150330	41278	Escherichia coli
GCA_020668435.1	JAIHLA000000000	SAMN20150329	6409	Escherichia coli
GCA_020668415.1	JAIHLD000000000	SAMN20150332	13-27-4	Escherichia coli
GCA_020668395.1	JAIHLC000000000	SAMN20150331	41338	Escherichia coli
GCA_020668375.1	JAIHLE000000000	SAMN20150333	6507	Escherichia coli
GCA_020668345.1	JAIHLG000000000	SAMN20150335	R1112	Escherichia coli
GCA_020668335.1	JAIHLF000000000	SAMN20150334	13-27-5	Escherichia coli
GCA_020668315.1	JAIHLJ000000000	SAMN20150338	S040	Escherichia coli
GCA_020668295.1	JAIHLH000000000	SAMN20150336	F-001.2	Escherichia coli
GCA_020668275.1	JAIHLI000000000	SAMN20150337	S032	Escherichia coli
GCA_020668225.1	JAIHLM000000000	SAMN20150341	S050	Escherichia coli
GCA_020668215.1	JAIHLL000000000	SAMN20150340	S049	Escherichia coli
GCA_020668205.1	JAIHLO000000000	SAMN20150343	S099	Escherichia coli
GCA_020668185.1	JAIHLK000000000	SAMN20150339	S041	Escherichia coli
GCA_020668175.1	JAIHLN000000000	SAMN20150342	R959	Escherichia coli
GCA_020670065.1	JAIHHX000000000	SAMN20150248	S157	Escherichia coli
GCA_020670045.1	JAIHHY000000000	SAMN20150249	S162	Escherichia coli
GCA_020670025.1	JAIHHZ000000000	SAMN20150250	R1169	Escherichia coli
GCA_020670005.1	JAIHIA000000000	SAMN20150251	R1056	Escherichia coli
GCA_020669985.1	JAIHID000000000	SAMN20150254	S221	Escherichia coli
GCA_020669965.1	JAIHIB000000000	SAMN20150252	F-002	Escherichia coli
GCA_020669945.1	JAIHIC000000000	SAMN20150253	F-009.2	Escherichia coli
GCA_020669925.1	JAIHIE000000000	SAMN20150255	S285	Escherichia coli
GCA_020669895.1	JAIHIH000000000	SAMN20150258	S341	Escherichia coli
GCA_020669885.1	JAIHIF000000000	SAMN20150256	S294	Escherichia coli
GCA_020669865.1	JAIHII000000000	SAMN20150259	F-012	Escherichia coli
GCA_020669845.1	JAIHIG000000000	SAMN20150257	F-011.3	Escherichia coli
GCA_020669825.1	JAIHIJ000000000	SAMN20150260	R1099	Escherichia coli
GCA_020669795.1	JAIHIN000000000	SAMN20150264	F-014	Escherichia coli
GCA_020669775.1	JAIHIM000000000	SAMN20150263	F-013.2	Escherichia coli
GCA_020669765.1	JAIHIK000000000	SAMN20150261	S401	Escherichia coli
GCA_020669745.1	JAIHIL000000000	SAMN20150262	S416	Escherichia coli
GCA_020669725.1	JAIHIO000000000	SAMN20150265	F-015.3	Escherichia coli
GCA_020669705.1	JAIHIP000000000	SAMN20150266	S455	Escherichia coli
GCA_020669685.1	JAIHIQ000000000	SAMN20150267	S517	Escherichia coli
GCA_020669655.1	JAIHIR000000000	SAMN20150268	S527	Escherichia coli
GCA_020669645.1	JAIHIS000000000	SAMN20150269	F-017.3	Escherichia coli
GCA_020669625.1	JAIHIT000000000	SAMN20150270	S515	Escherichia coli
GCA_020669595.1	JAIHIU000000000	SAMN20150271	F-020.2	Escherichia coli
GCA_020669575.1	JAIHIV000000000	SAMN20150272	S572	Escherichia coli
GCA_020669555.1	JAIHIX000000000	SAMN20150274	S583	Escherichia coli
GCA_020669535.1	JAIHIY000000000	SAMN20150275	F-005.3	Escherichia coli
GCA_020669515.1	JAIHIZ000000000	SAMN20150276	12-27-1	Escherichia coli
GCA_020669475.1	JAIHJA000000000	SAMN20150277	R1164	Escherichia coli
GCA_020669485.1	JAIHJB000000000	SAMN20150278	R1121	Escherichia coli
GCA_020669455.1	JAIHJC000000000	SAMN20150279	R1391	Escherichia coli
GCA_020669435.1	JAIHJD000000000	SAMN20150280	R1241	Escherichia coli
GCA_020669405.1	JAIHJG000000000	SAMN20150283	R1123	Escherichia coli
GCA_020669395.1	JAIHJE000000000	SAMN20150281	40969	Escherichia coli
GCA_020669375.1	JAIHJF000000000	SAMN20150282	40970	Escherichia coli
GCA_020669355.1	JAIHJH000000000	SAMN20150284	R1307	Escherichia coli
GCA_020669335.1	JAIHJI000000000	SAMN20150285	R1308	Escherichia coli
GCA_020669315.1	JAIHJJ000000000	SAMN20150286	R1320	Escherichia coli
GCA_020669295.1	JAIHJL000000000	SAMN20150288	40971	Escherichia coli
GCA_020669275.1	JAIHJM000000000	SAMN20150289	5287	Escherichia coli
GCA_020669255.1	JAIHJK000000000	SAMN20150287	5226	Escherichia coli
GCA_020669235.1	JAIHJN000000000	SAMN20150290	5290	Escherichia coli
GCA_020669215.1	JAIHJP000000000	SAMN20150292	R1261	Escherichia coli
GCA_020669175.1	JAIHJQ000000000	SAMN20150293	5421	Escherichia coli
GCA_020669165.1	JAIHJO000000000	SAMN20150291	5324	Escherichia coli
GCA_020669155.1	JAIHJR000000000	SAMN20150294	40973	Escherichia coli
GCA_020669135.1	JAIHJS000000000	SAMN20150295	40913	Escherichia coli
GCA_020669115.1	JAIHJT000000000	SAMN20150296	6018	Escherichia coli
GCA_020669085.1	JAIHJU000000000	SAMN20150297	R1411	Escherichia coli
GCA_020669075.1	JAIHJV000000000	SAMN20150298	13-117-1	Escherichia coli
GCA_020669055.1	JAIHJW000000000	SAMN20150299	6023	Escherichia coli
GCA_020669035.1	JAIHJX000000000	SAMN20150300	6025	Escherichia coli
GCA_020669015.1	JAIHJZ000000000	SAMN20150302	6039	Escherichia coli
GCA_020668995.1	JAIHJY000000000	SAMN20150301	6038	Escherichia coli
GCA_020668975.1	JAIHKA000000000	SAMN20150303	R1445	Escherichia coli
GCA_020668955.1	JAIHKD000000000	SAMN20150306	6110	Escherichia coli
GCA_020668935.1	JAIHKC000000000	SAMN20150305	6095	Escherichia coli
GCA_020668915.1	JAIHKB000000000	SAMN20150304	R1452	Escherichia coli
GCA_020668895.1	JAIHKE000000000	SAMN20150307	6113	Escherichia coli
GCA_020668875.1	JAIHKH000000000	SAMN20150310	41276	Escherichia coli
GCA_020668845.1	JAIHKF000000000	SAMN20150308	R1470	Escherichia coli
GCA_020668835.1	JAIHKG000000000	SAMN20150309	R1480	Escherichia coli
GCA_020668815.1	JAIHKJ000000000	SAMN20150312	6136	Escherichia coli
GCA_020668795.1	JAIHKI000000000	SAMN20150311	41335	Escherichia coli
GCA_020668745.1	JAIHKK000000000	SAMN20150313	R1508	Escherichia coli
GCA_020668725.1	JAIHKM000000000	SAMN20150315	13-27-2	Escherichia coli
GCA_020668755.1	JAIHKO000000000	SAMN20150317	6207	Escherichia coli
GCA_020668715.1	JAIHKL000000000	SAMN20150314	41307	Escherichia coli
GCA_020668695.1	JAIHKN000000000	SAMN20150316	6190	Escherichia coli
GCA_020673245.1	JAIHBU000000000	SAMN20150089	13-117-2s	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020673215.1	JAIHBX000000000	SAMN20150092	13-6191-2s	Salmonella enterica subsp. enterica serovar Hadar
GCA_020673205.1	JAIHBV000000000	SAMN20150090	13-1476-2s	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020673185.1	JAIHBW000000000	SAMN20150091	13-1507-2s	Salmonella enterica subsp. enterica serovar Schwarzengrund
GCA_020673165.1	JAIHBY000000000	SAMN20150093	13-6196-2s	Salmonella enterica subsp. enterica serovar Kiambu
GCA_020673145.1	JAIHCB000000000	SAMN20150096	R919	Salmonella enterica subsp. enterica serovar Newport
GCA_020673105.1	JAIHCA000000000	SAMN20150095	R914	Salmonella enterica subsp. enterica serovar Newport
GCA_020673115.1	JAIHCC000000000	SAMN20150097	R1325	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020673085.1	JAIHBZ000000000	SAMN20150094	13-1550-3s	Salmonella enterica subsp. enterica serovar Hadar
GCA_020673065.1	JAIHCD000000000	SAMN20150098	R932	Salmonella enterica subsp. enterica serovar Newport
GCA_020673035.1	JAIHCE000000000	SAMN20150099	S091	Salmonella enterica subsp. enterica serovar Agona
GCA_020673025.1	JAIHCF000000000	SAMN20150100	S093	Salmonella enterica subsp. enterica serovar Agona
GCA_020673005.1	JAIHCG000000000	SAMN20150101	R960	Salmonella enterica subsp. enterica serovar Agona
GCA_020672985.1	JAIHCI000000000	SAMN20150103	S173	Salmonella enterica subsp. enterica serovar Newport
GCA_020672965.1	JAIHCH000000000	SAMN20150102	S170	Salmonella enterica subsp. enterica serovar Newport
GCA_020672945.1	JAIHCJ000000000	SAMN20150104	R996	Salmonella enterica subsp. diarizonae serovar 11:k:z53
GCA_020672925.1	JAIHCK000000000	SAMN20150105	R1167	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672905.1	JAIHCL000000000	SAMN20150106	R1078	Salmonella enterica subsp. enterica serovar Newport
GCA_020672885.1	JAIHCM000000000	SAMN20150107	R926	Salmonella enterica subsp. enterica serovar Newport
GCA_020672865.1	JAIHCN000000000	SAMN20150108	R475	Salmonella enterica subsp. enterica serovar Agona
GCA_020672845.1	JAIHCP000000000	SAMN20150110	R919	Salmonella enterica subsp. enterica serovar Newport
GCA_020672825.1	JAIHCO000000000	SAMN20150109	S213	Salmonella enterica subsp. enterica serovar Agona
GCA_020672805.1	JAIHCQ000000000	SAMN20150111	R1056	Salmonella enterica subsp. enterica serovar Agona
GCA_020672775.1	JAIHCR000000000	SAMN20150112	R1202	Salmonella enterica subsp. enterica serovar Agona
GCA_020672765.1	JAIHCS000000000	SAMN20150113	F-009	Salmonella enterica subsp. enterica serovar Agona
GCA_020672725.1	JAIHCV000000000	SAMN20150116	S295	Salmonella enterica subsp. enterica serovar Newport
GCA_020672745.1	JAIHCT000000000	SAMN20150114	F-010	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020672705.1	JAIHCW000000000	SAMN20150117	S298	Salmonella enterica subsp. enterica serovar Newport
GCA_020672685.1	JAIHCU000000000	SAMN20150115	S283	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020672665.1	JAIHCX000000000	SAMN20150118	F-011	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672645.1	JAIHDA000000000	SAMN20150121	S397	Salmonella enterica subsp. enterica serovar Newport
GCA_020672615.1	JAIHCZ000000000	SAMN20150120	S326	Salmonella enterica subsp. enterica serovar Newport
GCA_020672605.1	JAIHCY000000000	SAMN20150119	F-012	Salmonella enterica subsp. enterica serovar Mbandaka
GCA_020672575.1	JAIHDC000000000	SAMN20150123	F-013	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020672565.1	JAIHDB000000000	SAMN20150122	S403	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_020672545.1	JAIHDD000000000	SAMN20150124	F-014	Salmonella enterica subsp. enterica serovar Agona
GCA_020672525.1	JAIHDF000000000	SAMN20150126	R1099	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672505.1	JAIHDG000000000	SAMN20150127	R605	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672485.1	JAIHDE000000000	SAMN20150125	R1098	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672465.1	JAIHDH000000000	SAMN20150128	R606	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672445.1	JAIHDJ000000000	SAMN20150130	R613	Salmonella enterica subsp. enterica serovar Newport
GCA_020672415.1	JAIHDI000000000	SAMN20150129	R612	Salmonella enterica subsp. enterica serovar Newport
GCA_020672405.1	JAIHDM000000000	SAMN20150133	S448	Salmonella enterica subsp. enterica serovar Newport
GCA_020672385.1	JAIHDK000000000	SAMN20150131	R1071	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672365.1	JAIHDL000000000	SAMN20150132	S437	Salmonella enterica subsp. enterica serovar 4,12:b:-
GCA_020672345.1	JAIHDO000000000	SAMN20150135	F-018	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020672325.1	JAIHDN000000000	SAMN20150134	F-017	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020672305.1	JAIHDP000000000	SAMN20150136	S511	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672275.1	JAIHDR000000000	SAMN20150138	F-016	Salmonella enterica subsp. enterica serovar Agona
GCA_020672265.1	JAIHDQ000000000	SAMN20150137	S525	Salmonella enterica subsp. enterica serovar Agona
GCA_020672245.1	JAIHDT000000000	SAMN20150140	R1325	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672225.1	JAIHDV000000000	SAMN20150142	F-020	Salmonella enterica subsp. enterica serovar Agona
GCA_020672205.1	JAIHDU000000000	SAMN20150141	F-019	Salmonella enterica subsp. enterica serovar O rough
GCA_020672185.1	JAIHDS000000000	SAMN20150139	S459	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672165.1	JAIHDW000000000	SAMN20150143	S563	Salmonella enterica subsp. diarizonae serovar 11:k:z53
GCA_020672145.1	JAIHDX000000000	SAMN20150144	R996	Salmonella enterica subsp. enterica serovar Newport
GCA_020672115.1	JAIHEA000000000	SAMN20150147	R1161	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672105.1	JAIHDY000000000	SAMN20150145	12-27-1	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672085.1	JAIHDZ000000000	SAMN20150146	5005	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672065.1	JAIHEB000000000	SAMN20150148	R1164	Salmonella enterica subsp. enterica serovar Infantis
GCA_020672045.1	JAIHEC000000000	SAMN20150149	5007	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020672015.1	JAIHEE000000000	SAMN20150151	R1169	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020672005.1	JAIHED000000000	SAMN20150150	R611	Salmonella enterica subsp. enterica serovar Braenderup
GCA_020671985.1	JAIHEF000000000	SAMN20150152	2012-01-01	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020671965.1	JAIHEG000000000	SAMN20150153	2012-03-01	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020671945.1	JAIHEI000000000	SAMN20150155	R1112	Salmonella enterica subsp. enterica serovar Agona
GCA_020671925.1	JAIHEH000000000	SAMN20150154	R1110	Salmonella enterica subsp. enterica serovar Newport
GCA_020671905.1	JAIHEJ000000000	SAMN20150156	R1194	Salmonella enterica subsp. enterica serovar Newport
GCA_020671885.1	JAIHEK000000000	SAMN20150157	R1466	Salmonella enterica subsp. enterica serovar Newport
GCA_020671865.1	JAIHEL000000000	SAMN20150158	R1202	Salmonella enterica subsp. enterica serovar Agona
GCA_020671835.1	JAIHEO000000000	SAMN20150161	R1121	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671825.1	JAIHEM000000000	SAMN20150159	R1203	Salmonella enterica subsp. enterica serovar Newport
GCA_020671805.1	JAIHEN000000000	SAMN20150160	R1208	Salmonella enterica subsp. enterica serovar Newport
GCA_020671785.1	JAIHEQ000000000	SAMN20150163	R1162	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671765.1	JAIHEP000000000	SAMN20150162	R1160	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671745.1	JAIHES000000000	SAMN20150165	R1134	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020671715.1	JAIHER000000000	SAMN20150164	R1133	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671705.1	JAIHET000000000	SAMN20150166	R1137	Salmonella enterica subsp. enterica serovar Rissen
GCA_020671675.1	JAIHEU000000000	SAMN20150167	R1167	Salmonella enterica subsp. enterica serovar Newport
GCA_020671665.1	JAIHEV000000000	SAMN20150168	2012-01-02	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020671645.1	JAIHEX000000000	SAMN20150170	R1466	Salmonella enterica subsp. enterica serovar Agona
GCA_020671615.1	JAIHEY000000000	SAMN20150171	R1056	Salmonella enterica subsp. enterica serovar Newport
GCA_020671605.1	JAIHEW000000000	SAMN20150169	5200	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671575.1	JAIHEZ000000000	SAMN20150172	R1111	Salmonella enterica subsp. enterica serovar Newport
GCA_020671565.1	JAIHFA000000000	SAMN20150173	R1199	Salmonella enterica subsp. enterica serovar Agona
GCA_020671545.1	JAIHFB000000000	SAMN20150174	R1247	Salmonella enterica subsp. enterica serovar Newport
GCA_020671525.1	JAIHFC000000000	SAMN20150175	R1249	Salmonella enterica subsp. enterica serovar Agona
GCA_020671505.1	JAIHFD000000000	SAMN20150176	R1254	Salmonella enterica subsp. enterica serovar Agona
GCA_020671465.1	JAIHFE000000000	SAMN20150177	R1257	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671455.1	JAIHFF000000000	SAMN20150178	R1260	Salmonella enterica subsp. enterica serovar Agona
GCA_020671445.1	JAIHFG000000000	SAMN20150179	R1268	Salmonella enterica subsp. enterica serovar Agona
GCA_020671415.1	JAIHFH000000000	SAMN20150180	R1126	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671405.1	JAIHFI000000000	SAMN20150181	R1168	Salmonella enterica subsp. enterica serovar Thompson
GCA_020671385.1	JAIHFJ000000000	SAMN20150182	R1277	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671355.1	JAIHFK000000000	SAMN20150183	R1262	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671345.1	JAIHFL000000000	SAMN20150184	R1310	Salmonella enterica subsp. enterica serovar Oranienburg
GCA_020671325.1	JAIHFM000000000	SAMN20150185	R1317	Salmonella enterica subsp. enterica serovar Newport
GCA_020671305.1	JAIHFO000000000	SAMN20150187	R1325	Salmonella enterica subsp. enterica serovar 4:12:b4
GCA_020671285.1	JAIHFN000000000	SAMN20150186	5207	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671265.1	JAIHFP000000000	SAMN20150188	R1247	Salmonella enterica subsp. enterica serovar Agona
GCA_020671235.1	JAIHFR000000000	SAMN20150190	R1280	Salmonella enterica subsp. enterica serovar Newport
GCA_020671225.1	JAIHFQ000000000	SAMN20150189	R1277	Salmonella enterica subsp. enterica serovar Agona
GCA_020671205.1	JAIHFS000000000	SAMN20150191	R1281	Salmonella enterica subsp. enterica serovar Agona
GCA_020671175.1	JAIHFT000000000	SAMN20150192	R1282	Salmonella enterica subsp. enterica serovar Newport
GCA_020671165.1	JAIHFU000000000	SAMN20150193	R1283	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671145.1	JAIHFV000000000	SAMN20150194	5274	Salmonella enterica subsp. enterica serovar Agona
GCA_020671125.1	JAIHFW000000000	SAMN20150195	5276	Salmonella enterica subsp. enterica serovar Hartford
GCA_020671085.1	JAIHFX000000000	SAMN20150196	R1154	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020671095.1	JAIHFY000000000	SAMN20150197	12-27-4	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671065.1	JAIHGA000000000	SAMN20150199	5283	Salmonella enterica subsp. enterica serovar Infantis
GCA_020671035.1	JAIHFZ000000000	SAMN20150198	12-117-4	Salmonella enterica subsp. enterica serovar Agona
GCA_020671025.1	JAIHGC000000000	SAMN20150201	5376	Salmonella enterica subsp. enterica serovar Agona
GCA_020671005.1	JAIHGB000000000	SAMN20150200	5288	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020670985.1	JAIHGD000000000	SAMN20150202	5377	Salmonella enterica subsp. enterica serovar Newport
GCA_020670955.1	JAIHGE000000000	SAMN20150203	5321	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020670945.1	JAIHGH000000000	SAMN20150206	R1288	Salmonella enterica subsp. enterica serovar Newport
GCA_020670925.1	JAIHGG000000000	SAMN20150205	2012-01-03	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020670905.1	JAIHGF000000000	SAMN20150204	5322	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670885.1	JAIHGI000000000	SAMN20150207	R1292	Salmonella enterica subsp. enterica serovar Newport
GCA_020670855.1	JAIHGK000000000	SAMN20150209	R1372	Salmonella enterica subsp. enterica serovar Hartford
GCA_020670845.1	JAIHGJ000000000	SAMN20150208	R1337	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670815.1	JAIHGM000000000	SAMN20150211	R1376	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670805.1	JAIHGL000000000	SAMN20150210	R1345	Salmonella enterica subsp. enterica serovar Newport
GCA_020670785.1	JAIHGN000000000	SAMN20150212	R1359	Salmonella enterica subsp. enterica serovar Agona
GCA_020670765.1	JAIHGP000000000	SAMN20150214	R1261	Salmonella enterica subsp. enterica serovar Newport
GCA_020670725.1	JAIHGR000000000	SAMN20150216	5425	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020670745.1	JAIHGO000000000	SAMN20150213	R1285	Salmonella enterica subsp. enterica serovar Newport
GCA_020670705.1	JAIHGQ000000000	SAMN20150215	5423	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670685.1	JAIHGS000000000	SAMN20150217	R1382	Salmonella enterica subsp. enterica serovar Newport
GCA_020670655.1	JAIHGT000000000	SAMN20150218	R1383	Salmonella enterica subsp. enterica serovar Hartford
GCA_020670645.1	JAIHGW000000000	SAMN20150221	5462	Salmonella enterica subsp. enterica serovar Newport
GCA_020670615.1	JAIHGU000000000	SAMN20150219	R1358	Salmonella enterica subsp. enterica serovar Newport
GCA_020670605.1	JAIHGV000000000	SAMN20150220	R1249	Salmonella enterica subsp. enterica serovar Hartford
GCA_020670575.1	JAIHGX000000000	SAMN20150222	5473	Salmonella enterica subsp. enterica serovar Agona
GCA_020670565.1	JAIHGZ000000000	SAMN20150224	5479	Salmonella enterica subsp. enterica serovar Newport
GCA_020670525.1	JAIHGY000000000	SAMN20150223	5475	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670535.1	JAIHHB000000000	SAMN20150226	2012-03-05	Salmonella enterica subsp. enterica serovar Livingstone
GCA_020670505.1	JAIHHA000000000	SAMN20150225	5481	Salmonella enterica subsp. enterica serovar Agona
GCA_020670485.1	JAIHHC000000000	SAMN20150227	R1414	Salmonella enterica subsp. enterica serovar Newport
GCA_020670455.1	JAIHHD000000000	SAMN20150228	R1418	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_020670445.1	JAIHHE000000000	SAMN20150229	R1422	Salmonella enterica subsp. enterica serovar Newport
GCA_020670415.1	JAIHHG000000000	SAMN20150231	R1465	Salmonella enterica subsp. enterica serovar Newport
GCA_020670405.1	JAIHHH000000000	SAMN20150232	R1466	Salmonella enterica subsp. enterica serovar Infantis
GCA_020670385.1	JAIHHI000000000	SAMN20150233	R1449	Salmonella enterica subsp. enterica serovar Heidelberg
GCA_020670365.1	JAIHHF000000000	SAMN20150230	6096	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_020670345.1	JAIHHJ000000000	SAMN20150234	R1485	Salmonella enterica subsp. enterica serovar Molade
GCA_020670305.1	JAIHHM000000000	SAMN20150237	R1296	Salmonella enterica subsp. enterica serovar Newport
GCA_020670295.1	JAIHHK000000000	SAMN20150235	6153	Salmonella enterica subsp. enterica serovar Newport
GCA_020670285.1	JAIHHN000000000	SAMN20150238	R1533	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670265.1	JAIHHL000000000	SAMN20150236	R1486	Salmonella enterica subsp. enterica serovar Poona
GCA_020670245.1	JAIHHO000000000	SAMN20150239	6491	Salmonella enterica subsp. enterica serovar 4,5,12:b:-
GCA_020670225.1	JAIHHQ000000000	SAMN20150241	6499	Salmonella enterica subsp. enterica serovar Poona
GCA_020670185.1	JAIHHR000000000	SAMN20150242	6326	Salmonella enterica subsp. enterica serovar Newport
GCA_020670175.1	JAIHHS000000000	SAMN20150243	2013-02-04	Salmonella enterica subsp. enterica serovar Poona
GCA_020670165.1	JAIHHP000000000	SAMN20150240	6496	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670145.1	JAIHHT000000000	SAMN20150244	6379	Salmonella enterica subsp. enterica serovar Poona
GCA_020670115.1	JAIHHW000000000	SAMN20150247	6377	Salmonella enterica subsp. enterica serovar Thompson
GCA_020670105.1	JAIHHU000000000	SAMN20150245	R1556	Salmonella enterica subsp. enterica serovar Newport
GCA_020670075.1	JAIHHV000000000	SAMN20150246	R1559	Salmonella enterica subsp. enterica serovar Thompson

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Epidemiology of Salmonella and E. coli in wildlife and environmental samples from swine farms in Ontario

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