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Accession: PRJNA74629 ID: 74629

Oxytricha trifallax strain:JRB310

Oxytricha trifallax Whole Genome Sequencing Project

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This project is a component of the NHGRI Large Scale Sequencing Program for Organismal Sequencing
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8 additional projects are related by organism.
149 additional projects are components of the NHGRI Large Scale Sequencing Program for Organismal Sequencing.
Oxytricha trifallax Whole Genome Sequencing Project. Macronuclear genome.
AccessionPRJNA74629
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismOxytricha trifallax[Taxonomy ID: 1172189]
Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha; Oxytricha trifallax
Publications
  • Lindblad KA et al., "Capture of complete ciliate chromosomes in single sequencing reads reveals widespread chromosome isoforms.", BMC Genomics, 2019 Dec 30;20(1):1037
  • Swart EC et al., "The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes.", PLoS Biol, 2013;11(1):e1001473
SubmissionRegistration date: 23-Sep-2015
Washington University Genome Sequencing Center
Locus Tag PrefixOXYTRI
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)2
SRA Experiments24
Publications
PubMed2
PMC2
Other datasets
BioSample16
Assembly2
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
2
2
SRA Data Details
ParameterValue
Data volume, Gbases42
Data volume, Mbytes27896
Related RefSeq Project
PRJNA258528 : Oxytricha trifallax macronuclear Whole Genome Sequencing Project

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