ID 760729 - BioProject

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Accession: PRJEB47340 ID: 760729

Genomic surveillance of SARS-CoV-2 in Portugal

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This project is a component of the INSDC SARS-CoV-2 Viral Sequencing Data

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961 additional projects are components of the INSDC SARS-CoV-2 Viral Sequencing Data.

Whole-genome sequencing data of SARS-CoV-2 collected in Portugal on behalf of the nationwide laboratory surveillance coordinated by the National Institute of Health Dr. More...

Accession	PRJEB47340
Scope	Monoisolate
Publications (total 9) Less...	Correia AM et al., "Potential recurrence of COVID-19 in a healthcare professional: SARS-CoV-2 genome sequencing confirms contagiousness after re-positivity.", Int J Infect Dis, 2021 Nov;112:318-320 More... Correia AM et al., "Potential recurrence of COVID-19 in a healthcare professional: SARS-CoV-2 genome sequencing confirms contagiousness after re-positivity.", Int J Infect Dis, 2021 Nov;112:318-320 Borges V et al., "Tracking SARS-CoV-2 lineage B.1.1.7 dissemination: insights from nationwide spike gene target failure (SGTF) and spike gene late detection (SGTL) data, Portugal, week 49 2020 to week 3 2021.", Euro Surveill, 2021 Mar;26(10) Borges V et al., "Long-Term Evolution of SARS-CoV-2 in an Immunocompromised Patient with Non-Hodgkin Lymphoma.", mSphere, 2021 Aug 25;6(4):e0024421 Borges V et al., "Nosocomial Outbreak of SARS-CoV-2 in a "Non-COVID-19" Hospital Ward: Virus Genome Sequencing as a Key Tool to Understand Cryptic Transmission.", Viruses, 2021 Apr 1;13(4) Funk T et al., "Characteristics of SARS-CoV-2 variants of concern B.1.1.7, B.1.351 or P.1: data from seven EU/EEA countries, weeks 38/2020 to 10/2021.", Euro Surveill, 2021 Apr;26(16) O'Toole Á et al., "Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch.", Wellcome Open Res, 2021;6:121 Correia CR et al., "Congenital SARS-CoV-2 Infection in a Neonate With Severe Acute Respiratory Syndrome.", Pediatr Infect Dis J, 2020 Dec;39(12):e439-e443 Borges V et al., "Massive dissemination of a SARS-CoV-2 Spike Y839 variant in Portugal.", Emerg Microbes Infect, 2020 Dec;9(1):2488-2496 Alm E et al., "Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020.", Euro Surveill, 2020 Aug;25(32) Less...
Submission	Registration date: 4-Sep-2021 NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	49651
Publications
PubMed	9
PMC	8
Other datasets
BioSample	49651

SRA Data Details

Parameter	Value
Data volume, Gbases	4,496
Data volume, Tbytes	1.84

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Genomic surveillance of SARS-CoV-2 in Portugal

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