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Genome Information for Hemiprocne comata
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The whiskered treeswft (Hemiprocne comata) is the smallest of 4 species in the genus Hemiprocne, and tropical areas of the Pacific Southwest (from Wikipedia entry). This sample from a female in the Philippians, collected by C. A. Ross and colleagues. It was further procured by Gary Graves of the Smithsonian Museum in Washington D.C., to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, lead by Olivier Fedrigo and Erich D. Jarvis, with support from Tom Gilbert and Jarvis.
| Accession | PRJNA776867 |
| Type | Umbrella project |
| Organism | Hemiprocne comata[Taxonomy ID: 243314] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Hemiprocninae; Hemiprocne; Hemiprocne comata |
| Submission | Registration date: 1-Nov-2021
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 34 |
| WGS master | 2 |
| SRA Experiments | 12 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
1
1
1
3
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA774831 | Chromosomes | Hemiprocne comata | Hemiprocne comata (whiskered treeswift) genome, bHemCom1, primary haplotype (Vertebrate Genomes Project) | | PRJNA774830 | Scaffolds | Hemiprocne comata | Hemiprocne comata (whiskered treeswift) genome, bHemCom1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA1008100 | SRA or Trace | Hemiprocne comata (whiskered treeswift) genome, bHemCom1, sequence data. | Hemiprocne comata (whiskered treeswift) genome, bHemCom1, sequence data. (G10K) |
|