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Genome Information for Theristicus caerulescens
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The plumbeous ibis (Theristicus caerulescens) is a large ibis that lives in central South America. Unlike some other ibis species, it is mostly solid in color (grey). It releases an unpleasantly musty odor when caught (from Wikipedia entry). This sample is from a female collected by C. N. Milensky in 2005, stored by the Smithsonian Institute. It was further procured by Gary Graves of the Smithsonian Museum in Washington D.C., to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, lead by Olivier Fedrigo and Erich D. Jarvis, with support from Tom Gilbert and Jarvis.
| Accession | PRJNA776872 |
| Type | Umbrella project |
| Organism | Theristicus caerulescens[Taxonomy ID: 1118847] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Theristicus; Theristicus caerulescens |
| Submission | Registration date: 1-Nov-2021
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 29 |
| WGS master | 2 |
| SRA Experiments | 3 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
1
1
1
3
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA774297 | Chromosomes | Theristicus caerulescens | Theristicus caerulescens (Plumbeous ibis) genome, bTheCae1, primary haplotype (Vertebrate Genomes Project) | | PRJNA774321 | Scaffolds | Theristicus caerulescens | Theristicus caerulescens (Plumbeous ibis) genome, bTheCae1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA1005982 | SRA or Trace | Theristicus caerulescens (Plumbeous ibis) genome, bTheCae1, sequence data. | Theristicus caerulescens (Plumbeous ibis) genome, bTheCae1, sequence data. (G10K) |
|