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Accession: PRJNA776876 ID: 776876

Hemiscyllium ocellatum (epaulette shark) genome, sHemOce1

See Genome Information for Hemiscyllium ocellatum
The epaulette shark (Hemiscyllium ocellatum) species of longtailed carpet shark, found in shallow, tropical waters off of Australia and New Guinea. The common name comes from the large, white-margined black spot behind each pectoral fin, reminiscent of military epaulettes. they are nocturnal and walk with their fins (from Wikipedia entries). This juvenile male is from trio of samples (parents) breed and collected to create a high-quality reference genome for both maternal and paternal haplotypes. The juvenile was bred in captivity. Breeding and sample collection was conducted by Frank Tulenko, in coordination with Gavin Naylor, Peter Currie, and Olivier Fedrigo. Spleen from the male was used to create high-quality reference genome assemblies of each haplotype. More...
AccessionPRJNA776876
TypeUmbrella project
OrganismHemiscyllium ocellatum[Taxonomy ID: 170820]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Hemiscyllium; Hemiscyllium ocellatum
SubmissionRegistration date: 1-Nov-2021
Vertebrate Genomes Project
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)45229
WGS master2
Transcript43156
SRA Experiments17
Protein Sequences36540
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases1,609
Data volume, Tbytes0.52
This project encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
SRA or Trace
Total

2
1
1
4
BioProject
accession
Assembly
level
NameTitle
PRJNA774309 ScaffoldsHemiscyllium ocellatumHemiscyllium ocellatum (epaulette shark) genome, sHemOce1, maternal haplotype (Vertebrate Genomes Project)
PRJNA774310 ChromosomesHemiscyllium ocellatumHemiscyllium ocellatum (epaulette shark) genome, sHemOce1, paternal + X haplotype (Vertebrate Genomes Project)
PRJNA1034606 ChromosomesHemiscyllium ocellatumHemiscyllium ocellatum isolate:sHemOce1 RefSeq Genome sequencing and assembly (NCBI)
PRJNA1008657 SRA or TraceHemiscyllium ocellatum (epaulette shark) genome, sHemOce1, sequence dataHemiscyllium ocellatum (epaulette shark) genome, sHemOce1, sequence data (G10K)

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