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Genome Information for Scatophagus argus
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The spotted scat (Scatophagus argus) is a two basic color morph fish (green or red), found from the Indo-Specific region to Australia. They are popular aquarium fish.This sample was collected by Byrappa Venkatesh, sequenced by Gene Myers group, in collaboration with Richard Durbin and Erich Jarvis, and used to generate a high-quality reference genome as part of the G10K-VGP and Fish VGP projects.
| Accession | PRJNA776881 |
| Type | Umbrella project |
| Organism | Scatophagus argus[Taxonomy ID: 75038] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Scatophagidae; Scatophagus; Scatophagus argus |
| Submission | Registration date: 1-Nov-2021
G10K |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 52926 |
| WGS master | 2 |
| Transcript | 52828 |
| SRA Experiments | 12 |
| Protein Sequences | 48205 |
| Other datasets |
| BioSample | 2 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
2
1
1
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA749579 | Chromosomes | Scatophagus argus | Scatophagus argus (Spotted scat) genome, fScaArg1, primary haplotype (G10K) | | PRJNA749580 | Scaffolds | Scatophagus argus | Scatophagus argus (Spotted scat) genome, fScaArg1, alternate haplotype (G10K) | | PRJNA776026 | Chromosomes | Scatophagus argus | Scatophagus argus isolate:fScaArg1 RefSeq Genome sequencing and assembly (NCBI) | | PRJNA1008551 | SRA or Trace | Scatophagus argus (Spotted scat) genome, fScaArg1, sequence data. | Scatophagus argus (Spotted scat) genome, fScaArg1, sequence data. (G10K) |
|